A comparison of RNA-Seq and high-density exon array for detecting differential gene expression between closely related species

S Liu, L Lin, P Jiang, D Wang, Y Xing - Nucleic acids research, 2011 - academic.oup.com
… by the high-density HJAY array and real-time qPCR, we systematically assessed how
accurately RNA-Seq can reveal gene expression differences between closely related species. …

Using DNA microarrays to study gene expression in closely related species

A Oshlack, AE Chabot, GK Smyth, Y Gilad - Bioinformatics, 2007 - academic.oup.com
… that gene expression studies within species can be performed using surrogate microarray
platforms for a closely related species. … that as long as orthologous genes are known, a human …

Divergence in gene expression within and between two closely related flycatcher species

S Uebbing, A Künstner, H Mäkinen… - Molecular …, 2016 - Wiley Online Library
… For comparison with chicken, we used three gene expression data sets of that species (NCBI
Accession nos. PRJNA143627 (Brawand et al. 2011), PRJEB4677, PRJNA248570). …

Using high-density exon arrays to profile gene expression in closely related species

L Lin, S Liu, H Brockway, J Seok, P Jiang… - Nucleic acids …, 2009 - academic.oup.com
… of gene expression profiles between species provide significant insight into gene regulation…
and intuitive approach for global expression profiling of closely related species, using high-…

Gene expression in closely related species mirrors local adaptation: consequences for responses to a warming world

ST O'Neil, JDK Dzurisin, CM Williams… - Molecular …, 2014 - Wiley Online Library
… on gene expression as related to previous work on fitness-based local adaptation for these
populations (Pelini et al. 2009). Given limited microarray resources and deme sampling, but …

Duplicate genes increase expression diversity in closely related species and allopolyploids

M Ha, ED Kim, ZJ Chen - Proceedings of the National …, 2009 - National Acad Sciences
expression divergence between two closely related speciesGene expression changes
coevolve with promoter … The gene expression changes in closely related species and …

[HTML][HTML] … (re-) annotation approach to generate unbiased mapping references for RNA-seq-based analyses of differential expression across closely related species

M Torres-Oliva, I Almudi, AP McGregor, N Posnien - BMC genomics, 2016 - Springer
gene expression levels of different genes within a species, … gene expression in different
species. Here we show that the published genomes of three closely related Drosophila species, …

Growth hormone differentially regulates growth and growth-related gene expression in closely related fish species

PR Biga, J Meyer - Comparative Biochemistry and Physiology Part A …, 2009 - Elsevier
… The current study was conducted to compare gene expression profiles … on gene expression
related to metabolic homeostasis, we analyzed glucose transporter protein (GLUT4) mRNA

Evolution of patterns of differential gene expression: A comparison of the temporal and spatial patterns of lsozyme locus expression in two closely related fish species  …

DP Philipp, WF Childers… - Journal of Experimental …, 1979 - Wiley Online Library
… between related species. Our results indicate that when comparing patterns of gene
expression between two species within the same genus or between two species in closely related

[HTML][HTML] The Cyprinodon variegatus genome reveals gene expression changes underlying differences in skull morphology among closely related species

ES Lencer, WC Warren, R Harrison, AR McCune - BMC genomics, 2017 - Springer
… In this study we identify modifications to the expression of genes at four developmental …
We find that gene expression differs significantly across recently diverged species of pupfish…