The developmental epigenomics toolbox: ChIP-seq and MethylCap-seq profiling of early zebrafish embryos
O Bogdanović, A Fernández-Miñán, JJ Tena… - Methods, 2013 - Elsevier
… -regulated DNA methylation remodeling … DNA methylation studies of early zebrafish
development rendering this method highly suitable for the global assessment of DNA methylation in …
development rendering this method highly suitable for the global assessment of DNA methylation in …
Dynamics of DNA hydroxymethylation in zebrafish
… hmC is not present during early zebrafish development, 16,21 … Even though the DNA
methylation level in the zebrafish … maternal genome leads to, our results show a lower methylation …
methylation level in the zebrafish … maternal genome leads to, our results show a lower methylation …
Zebrafish embryos as a screen for DNA methylation modifications after compound exposure
MC Bouwmeester, S Ruiter, T Lommelaars… - Toxicology and applied …, 2016 - Elsevier
… In conclusion, the zebrafish embryo is a potential screening tool to examine DNA methylation
modifications after xenobiotic exposure. The next step is to examine the adult phenotype of …
modifications after xenobiotic exposure. The next step is to examine the adult phenotype of …
DNA methylation and histone modifications are essential for regulation of stem cell formation and differentiation in zebrafish development
AD Marchione, Z Thompson… - … in functional genomics, 2021 - academic.oup.com
… , including methylation and acetylation of specific lysine (K) residues, are established on
histones [3]. Genomes undergo global methylation changes to stabilize DNA methylation levels …
histones [3]. Genomes undergo global methylation changes to stabilize DNA methylation levels …
Ionizing radiation induces transgenerational effects of DNA methylation in zebrafish
… We included a list of empirically derived developmental stage specific DMR (dsDMRs) that
are dynamically methylated during early zebrafish development 63 , and a computationally …
are dynamically methylated during early zebrafish development 63 , and a computationally …
Embryonic DNA methylation: insights from the genomics era
O Bogdanović… - … in functional genomics, 2014 - academic.oup.com
… While the bulk of genomic DNA methylation is static throughout the mammalian life cycle,
global DNA methylation erasure and re-establishment can be observed during early …
global DNA methylation erasure and re-establishment can be observed during early …
Packaging development: how chromatin controls transcription in zebrafish embryogenesis
JA Horsfield - Biochemical Society Transactions, 2019 - portlandpress.com
… transcriptional programmes during early zebrafish development, patterning and … DNA
methylation patterns of the two parental genomes by passively deterring DNA methylation …
methylation patterns of the two parental genomes by passively deterring DNA methylation …
Molecular evolution of zebrafish dnmt3 genes and thermal plasticity of their expression during embryonic development
C Campos, LMP Valente, JMO Fernandes - Gene, 2012 - Elsevier
… In mammals, proper patterns of DNA methylation are essential not only for … DNA methylation
reprogramming has been investigated. Significant differences in genome DNA methylation …
reprogramming has been investigated. Significant differences in genome DNA methylation …
Loss of DNA methylation in zebrafish embryos activates retrotransposons to trigger antiviral signaling
Y Chernyavskaya, R Mudbhary, C Zhang… - …, 2017 - journals.biologists.com
… Both sources of DNA increased the number of macrophages … that genomic DNA from whole
embryos contains cells with varying amounts of DNA methylation and thus the genomic DNA …
embryos contains cells with varying amounts of DNA methylation and thus the genomic DNA …
A role for DNA methylation in gastrulation and somite patterning
CC Martin, L Laforest, MA Akimenko, M Ekker - Developmental biology, 1999 - Elsevier
… Global changes in DNA methylation during early zebrafish development. … into a relative
increase in genome DNA methylation. Following fertilization, the diploid genome of the early …
increase in genome DNA methylation. Following fertilization, the diploid genome of the early …