Genomic patterns and context specific interpretation of DNA methylation

T Baubec, D Schübeler - Current opinion in genetics & development, 2014 - Elsevier
… mammalian genomes. Recent advances generated genomic DNA methylation maps during
… Combined with functional assays this revealed that dynamics in DNA methylation coincide …

Genomic patterns of DNA methylation: targets and function of an epigenetic mark

M Weber, D Schübeler - Current opinion in cell biology, 2007 - Elsevier
DNA methylation on a genome-wide scale have given new insights into the biological function
of DNA methylation in maintaining genome … focus on aberrant DNA methylation in cancer, …

Genome-wide analysis of DNA methylation patterns

D Zilberman, S Henikoff - 2007 - journals.biologists.com
… This is largely owing to our limited knowledge of DNA methylation patterns. A study … to
unravel genomic methylation patterns, particularly in the complex genomes of vertebrates. …

Genome‐wide DNA methylation profiling

M Bibikova, JB Fan - Wiley Interdisciplinary Reviews: Systems …, 2010 - Wiley Online Library
… sequencing technologies, genome-wide bisulfite … -genome approaches have been used
to get the most comprehensive DNA methylation profiles in organisms of various genome sizes. …

Profiling DNA methylation patterns using genomic tiling microarrays

Z Lippman, AV Gendrel, V Colot, R Martienssen - Nature methods, 2005 - nature.com
… without bias toward coding sequences, allow DNA methylation patterns of all sequence types
to be … DNA methylation patterns in more complex genomes, such as the human genome. A …

Predicting genome-wide DNA methylation using methylation marks, genomic position, and DNA regulatory elements

W Zhang, TD Spector, P Deloukas, JT Bell… - Genome biology, 2015 - Springer
… We characterize genome-wide DNA methylation patterns, and … methylation levels at CpG
site resolution using features including neighboring CpG site methylation levels and genomic

[HTML][HTML] Dietary patterns are associated with levels of global genomic DNA methylation in a cancer-free population

FF Zhang, A Morabia, J Carroll, K Gonzalez… - The Journal of …, 2011 - Elsevier
… relationship between dietary patterns and levels of genomic DNA methylation in peripheral
Genomic DNA methylation was measured using bisulfite conversion of DNA and real-time …

Genome-wide quantitative assessment of variation in DNA methylation patterns

H Xie, M Wang, A De Andrade, MF Bonaldo… - Nucleic acids …, 2011 - academic.oup.com
genomic DNA methylation patterns can also be remarkably accurate (10). By the analysis of
DNA methylation patterns derived from the genomic DNA … fidelities of methylation patterns to …

Regulation and function of mammalian DNA methylation patterns: a genomic perspective

H Wu, J Tao, YE Sun - Briefings in Functional Genomics, 2012 - academic.oup.com
DNA methylation and DNMT occupancy on a whole-genome … the gene regulatory function
of DNA methylation. We begin by … towards genome-wide mapping of DNA methylation. We …

Genome‐wide DNA methylation profiles in precancerous conditions and cancers

Y Kanai - Cancer science, 2010 - Wiley Online Library
… instability through DNA hypomethylation in pericentromeric satellite regions. Genome-wide
analysis of DNA methylation status has revealed that the DNA methylation profile at the …