Chromatin states of developmentally-regulated genes revealed by DNA and histone methylation patterns in zebrafish embryos.

LC Lindeman, CL Winata, H Aanes… - International …, 2010 - search.ebscohost.com
zebrafish, despite its importance as a model organism. We report here DNA methylation and
histone modification … , in zebrafish embryos at the mid-late blastula transition, shortly after …

[HTML][HTML] Reprogramming histone modification patterns to coordinate gene expression in early zebrafish embryos

W Zhu, X Xu, X Wang, J Liu - BMC genomics, 2019 - Springer
… in zebrafish oocytes, we speculate that the histone modification reprogramming processes
in … We present the histone modification dynamics in the early embryos of zebrafish and draw …

The specific alteration of histone methylation profiles by DZNep during early zebrafish development

O Østrup, AH Reiner, P Aleström, P Collas - Biochimica et Biophysica Acta …, 2014 - Elsevier
… of histone marks, including histone methylation by HMTs. During the first cell cycles, the
zebrafish (Danio rerio) embryonicZebrafish embryos used for the present study were obtained …

Histone modifications in zebrafish development

VT Cunliffe - Methods in Cell Biology, 2016 - Elsevier
… The RefSeq gene pax2a is aligned with ChIP-seq data for a selected range of whole embryo
and whole larva histone modification tracks for several different developmental stages. A …

Variant Histone H2afv reprograms DNA methylation during early zebrafish development

B Madakashira, L Corbett, C Zhang, P Paoli… - Epigenetics, 2017 - Taylor & Francis
… We report that depletion of H2afv from early zebrafish embryos results in a global increase …
between the histone code and DNA methylation factors pattern the embryonic methylome and …

[HTML][HTML] Genome-wide epigenetic cross-talk between DNA methylation and H3K27me3 in zebrafish embryos

E de la Calle Mustienes, JL Gómez-Skarmeta… - Genomics data, 2015 - Elsevier
… DNA methylation and histone modifications are … Zebrafish embryos were collected at the
following stages: blastula (dome), pharyngula (24 hpf) and hatching (48 hpf). For Methylated

Roles and regulation of histone methylation in animal development

A Jambhekar, A Dhall, Y Shi - Nature reviews Molecular cell biology, 2019 - nature.com
… Early embryonic systems display unique histone methylation patterns, prominently including
… in zebrafish embryos at this stage). However, the H3K4me3-marked genes in zebrafish

SmyD1, a histone methyltransferase, is required for myofibril organization and muscle contraction in zebrafish embryos

X Tan, J Rotllant, H Li, P DeDeyne… - Proceedings of the …, 2006 - National Acad Sciences
… methyltransferases (HMTase), we performed an in vitro histone methylation assay by using
recombinant SmyD1a and SmyD1b proteins. The results showed that both SmyD1a and …

[HTML][HTML] Developmental features of DNA methylation during activation of the embryonic zebrafish genome

IS Andersen, AH Reiner, H Aanes, P Aleström, P Collas - Genome biology, 2012 - Springer
methylation -1 to 0 kb of the TSS in zebrafish embryos, indicating that promoter DNA methylation
is not a key determinant of embryonicHistone methylation data are from our laboratory […

[HTML][HTML] Pcgf1 regulates early neural tube development through histone methylation in zebrafish

X Li, G Ji, J Zhou, J Du, X Li, W Shi, Y Hu… - Frontiers in cell and …, 2021 - frontiersin.org
… In this study, we found that zebrafish embryos exhibited a … Moreover, the neural induction
process of zebrafish embryos … Pcgf1 increased the expression of histone demethylases. Finally, …