Molecular processes connecting DNA methylation patterns with DNA methyltransferases and histone modifications in mammalian genomes

A Jeltsch, J Broche, P Bashtrykov - Genes, 2018 - mdpi.com
… in different genomic elements. After summarizing the impact of DNA methylation on genome
… Moreover, we present the mechanistic features of mammalian DNA methyltransferases and …

Biased gene conversion and the evolution of mammalian genomic landscapes

L Duret, N Galtier - Annual review of genomics and human …, 2009 - annualreviews.org
… the recent evidence for a GC-biased gene conversion process in mammals, and its
consequences for genomic landscapes, molecular evolution, and human functional genomics. …

The three-dimensional organization of mammalian genomes

M Yu, B Ren - Annual review of cell and developmental biology, 2017 - annualreviews.org
genome organization in mammalian genomes. We start with an introduction of the major tools
used to map 3D genome … of 3D genome organization during various biological processes

Genes involved in complex adaptive processes tend to have highly conserved upstream regions in mammalian genomes

S Lee, I Kohane, S Kasif - BMC genomics, 2005 - Springer
… observed with respect to other mammalian genomes and is not specific to human and mouse,
we conducted a similar analysis based on human and dog genomes. The same key terms …

Recent advances in the spatial organization of the mammalian genome

Y Kumar, D Sengupta, WA Bickmore - Journal of biosciences, 2020 - Springer
… nucleus impacts all nuclear processes including but not limited to … mammalian genome
regulates different nuclear processes. Recent advances in microscopy and a myriad of genomics

A guide to the mammalian genome

Y Okazaki, DA Hume - Genome Research, 2003 - genome.cshlp.org
… Only a small proportion of the genome encodes mRNAs that in … The key to reliable annotation
of a mammalian genome is … to a lesser extent in many other mammals, there are millions of …

Genomic imprinting and physiological processes in mammals

V Tucci, AR Isles, G Kelsey, AC Ferguson-Smith… - Cell, 2019 - cell.com
… Imprinted genes reside mostly, but not exclusively, in clusters throughout the mammalian
genome; a cluster typically contains a single ICR, which harbors germline-derived parental-…

On choosing mammalian genomes for sequencing

SJ O'Brien, E Eizirik, WJ Murphy - Science, 2001 - science.org
… Birds and small mammals first appear in early November but … ancestors of modern families
of mammals make their debut, … Mammals flourish for the last 50 to 60 days of the movie year, …

Genome size evolution: sizing mammalian genomes

CA Redi, E Capanna - Cytogenetic and genome research, 2012 - karger.com
… a very interesting group on which to perform GS molecular analyses: the evolutionary …
lutionary processes affecting old mammalian clades in isolated contexts. Recent molecular data …

Characterization of evolutionary rates and constraints in three mammalian genomes

GM Cooper, M Brudno, EA Stone, I Dubchak… - Genome …, 2004 - genome.cshlp.org
processes exhibit shifts during evolution even between closely related species), we sought
such estimates because they are useful for molecular … of stationary Markov processes, and …