… of methyl-DNA immunoprecipitation (MeDIP) and methyl-CpG binding domain (MBD) protein capture for genome-wide DNA methylation analysis reveal CpG …

SS Nair, MW Coolen, C Stirzaker, JZ Song… - Epigenetics, 2011 - Taylor & Francis
… vital to understand DNA methylation changes that occur … study, we compared two commonly
used approaches to enrich for methylated DNA regions of the genome, namely methylDNA

DNA methylation analysis techniques

C Dahl, P Guldberg - Biogerontology, 2003 - Springer
… All methods for gene-specific methylation analysis described in this review either use
MSREs or bisulfite. For a more comprehensive review of methods allowing identification of 5-…

DNA methylation analysis: choosing the right method

S Kurdyukov, M Bullock - Biology, 2016 - mdpi.com
… Non-CpG methylation in a CHH and CHG context (where H = A, … is to inform biologists studying
DNA methylation of the pros and … when choosing a method for DNA methylation analysis: …

DNA methylation analysis: a review of current methodologies

EJ Oakeley - Pharmacology & therapeutics, 1999 - Elsevier
… The final genome-wide approach to the study of DNA methylation makes use of the highly
specific reaction between monoclonal antibodies and m5C. The simplest approach is to …

DNA methylation analysis by MethyLight technology

BN Trinh, TI Long, PW Laird - Methods, 2001 - Elsevier
… 3B, the methylation methylation-specific priming. If a promoter region is status of … CpG
dinucleotides is interrochosen for analysis, we recommend that the probe be gated. With six CpG

Genome-scale DNA methylation analysis

SD Fouse, RP Nagarajan, JF Costello - Epigenomics, 2010 - Taylor & Francis
… Considering the 29 million CpGs in the haploid genome, DNA methylation patterns in …
Several general methylation patterns are recognized. First, 7% of all CpGs are within CpG islands (…

A practical guide to the measurement and analysis of DNA methylation

BD Singer - American journal of respiratory cell and molecular …, 2019 - atsjournals.org
… topics in DNA methylation measurement and data analysis, … of mechanisms linking DNA
methylation to cellular function. … for the future of unsupervised DNA methylation analysis (60). …

Methods for analysis of specific DNA methylation status

MJ Pajares, C Palanca-Ballester, R Urtasun… - Methods, 2021 - Elsevier
… This review highlights several considerations for specific DNA methylation analysis.
Understanding the type of information provided by and based on the advantages and limitations of …

Principles and challenges of genome-wide DNA methylation analysis

PW Laird - Nature Reviews Genetics, 2010 - nature.com
DNA methylation analysis, with a particular emphasis on genome-scale DNA methylation
analysis … challenges that are unique to DNA methylation analysis are outlined. Although some …

MIRA-seq for DNA methylation analysis of CpG islands

M Jung, S Kadam, W Xiong, TA Rauch, SG Jin… - …, 2015 - Taylor & Francis
… (MIRA), is based on the high affinity of the MBD2b-MBD3L1 complex for CpG-methylated DNA.
… -scale DNA methylation analysis platform for scoring DNA methylation differences at CpG-…