… in methyl transfer to DNA and the effect of methylation on DNA-protein interactions, with
particular … as minor bases, but rather as key bases which help regulate the functions of DNA. …

… of protein–DNA complexes, here we show that the binding of arginine residues to narrow
minor grooves is a widely used mode for protein–DNA … that narrow minor grooves strongly …

… protein contacts with DNA are invariably through the major groove, apart from a few notable
exceptions such as the minor … minor groove contacts are common even for those proteins …

… One of the very few views of ternary drug–DNA–protein complexes at the atomic level is …
base-pair DNA sequence and a high-mobility-group (HMG) chromosomal architectural protein. …

… the HMG-box–containing proteins SRY and LEF-1.Each of these proteins interacts with DNA
exclusively through minor groovecontacts and alters DNA conformation. This paper reviews …

… However, no single protein structure motif has been identified that provides a general amino
acid–base pair code for the minor groove, although there has been remarkable progress …

… average B DNA values, whereas the minor groove of high-… base pairs in the center is
unfavorable for Fis binding because of the increased conformational cost of compressing the minor …

… protein-protein interface sites. By looking at the number and positioning of protein residue-DNA
base interactions in a series of interaction footprints, three modes of DNA binding were …

… DNA target sequences for regulatory proteins. Pairwise potentials that determine the interaction
between bases … compatibility between DNA sequences and the protein–DNA complex …

… DNA bases for proteins approaching the duplex in the minor groove. This is an important
result, since the protein–base … the pattern of donor and acceptor groups along the base edges. …