[HTML][HTML] Perspective on oncogenic processes at the end of the beginning of cancer genomics

L Ding, MH Bailey, E Porta-Pardo, V Thorsson… - Cell, 2018 - cell.com
… tumors from 33 cancer types, we present our current understanding of the molecular
processes governing oncogenesis. We illustrate our insights into cancer through synthesis of the …

A comprehensive overview of oncogenic pathways in human cancer

F Li, T Wu, Y Xu, Q Dong, J Xiao, Y Xu… - Briefings in …, 2020 - academic.oup.com
oncogenic pathways by integrating TCGA pan-cancer data sets. Multi-omics analysis showed
oncogenic … multiple omics data of pan-cancers from The Cancer Genome Atlas (TCGA) [4], …

Emerging landscape of oncogenic signatures across human cancers

G Ciriello, ML Miller, BA Aksoy, Y Senbabaoglu… - Nature …, 2013 - nature.com
… of oncogenic processes and by the resulting variation in therapeutic responses. Projects
such as The Cancer Genome Atlas (… We refer to this trend as the cancer genome hyperbola. …

Cancer genomics: technology, discovery, and translation

B Tran, JE Dancey, S Kamel-Reid… - Journal of Clinical …, 2012 - ascopubs.org
… Gene selection for MP has focused on oncogenes, tumor suppressor genes, and
genomic stability genes. However, we believe that to fully implement PCM, germline genetic …

Beyond the oncogene paradigm: understanding complexity in cancerogenesis

M Bizzarri, A Cucina, F Conti, F D'Anselmi - Acta biotheoretica, 2008 - Springer
… , can occur “completely independently of oncogenic or tumor suppressor or mismatch repair
mutations and would not be detected by a human cancer genome sequencing effort. [….] A …

Cancer whole-genome sequencing: present and future

H Nakagawa, CP Wardell, M Furuta, H Taniguchi… - Oncogene, 2015 - nature.com
… a number of cancer genome profiles by whole-genome sequencing (WGS). To explore cancer
genomic alterations and their diversity comprehensively, global and local cancer genome-…

Cancer epigenomics: beyond genomics

J Sandoval, M Esteller - Current opinion in genetics & development, 2012 - Elsevier
… and oncogenesis. … the field of genomics, many laboratories around the world are working
together as part of the International Cancer Genome Consortium, or collaborating in the Cancer

Oncogenes and tumor suppressor genes: comparative genomics and network perspectives

K Zhu, Q Liu, Y Zhou, C Tao, Z Zhao, J Sun, H Xu - BMC genomics, 2015 - Springer
cancer genome projects produced multi-dimensional genome-wide big data such as The
Cancer Genome … Sanger Institute's Cancer Genome Project [8], and the International Cancer

Genomics-driven oncology: framework for an emerging paradigm

LA Garraway - Journal of Clinical Oncology, 2013 - ascopubs.org
… A majority of cancers are driven by genomic alterations that dysregulate key oncogenic
pathways … hypothesis of the cancer genome era: The use of cancer genomic information to guide …

From oncogene to network addiction: the new frontier of cancer genomics and therapeutics

G Tonon - Future Oncology, 2008 - Taylor & Francis
… The focus of this review is on cancer genes that could be identified by genomic … to oncogenes,
since it is much easier to pharmacologically reduce the activity of a hyperactive oncogene