Differential methylation in CN-AML preferentially targets non-CGI regions and is dictated by DNMT3A mutational status and associated with predominant …

Y Qu, A Lennartsson, VI Gaidzik, S Deneberg… - Epigenetics, 2014 - Taylor & Francis
The extent and role of aberrant DNA methylation in promoter CpG islands (CGIs) have been
extensively studied in leukemia and other malignancies. Still, CGIs represent only a small …

Profiling of aberrant DNA methylation in acute myeloid leukemia reveals subclasses of CG-rich regions with epigenetic or genetic association

C Gebhard, D Glatz, L Schwarzfischer, J Wimmer… - Leukemia, 2019 - nature.com
Malignant transformation is frequently associated with disease-specific epigenetic
alterations, but the underlying mechanisms and pathophysiological consequences remain …

Genome-wide identification of aberrantly methylated promoter associated CpG islands in acute lymphocytic leukemia

SQ Kuang, WG Tong, H Yang, W Lin, MK Lee, ZH Fang… - Leukemia, 2008 - nature.com
We performed a genome-wide analysis of promoter associated CpG island methylation
using methylated CpG island amplification (MCA) coupled to representational differential …

[HTML][HTML] Acute lymphoblastic leukemia displays a distinct highly methylated genome

S Hetzel, AL Mattei, H Kretzmer, C Qu, X Chen, Y Fan… - Nature Cancer, 2022 - nature.com
DNA methylation is tightly regulated during development and is stably maintained in healthy
cells. In contrast, cancer cells are commonly characterized by a global loss of DNA …

Large conserved domains of low DNA methylation maintained by Dnmt3a

M Jeong, D Sun, M Luo, Y Huang, GA Challen… - Nature …, 2014 - nature.com
Gains and losses in DNA methylation are prominent features of mammalian cell types. To
gain insight into the mechanisms that promote shifts in DNA methylation and contribute to …

[HTML][HTML] Changes in correlation between promoter methylation and gene expression in cancer

M Moarii, V Boeva, JP Vert, F Reyal - BMC genomics, 2015 - Springer
Background Methylation of high-density CpG regions known as CpG Islands (CGIs) has
been widely described as a mechanism associated with gene expression regulation …

Comparison of methyl-DNA immunoprecipitation (MeDIP) and methyl-CpG binding domain (MBD) protein capture for genome-wide DNA methylation analysis reveal …

SS Nair, MW Coolen, C Stirzaker, JZ Song… - Epigenetics, 2011 - Taylor & Francis
DNA methylation primarily occurs at CpG dinucleotides in mammals and is a common
epigenetic mark that plays a critical role in the regulation of gene expression. Profiling DNA …

[HTML][HTML] Corruption of the intra-gene DNA methylation architecture is a hallmark of cancer

TE Bartlett, A Zaikin, SC Olhede, J West… - Plos one, 2013 - journals.plos.org
Epigenetic processes-including DNA methylation-are increasingly seen as having a
fundamental role in chronic diseases like cancer. It is well known that methylation levels at …

[HTML][HTML] Genome-wide profiling of DNA methylation reveals a class of normally methylated CpG island promoters

L Shen, Y Kondo, Y Guo, J Zhang, L Zhang… - PLoS …, 2007 - journals.plos.org
The role of CpG island methylation in normal development and cell differentiation is of keen
interest, but remains poorly understood. We performed comprehensive DNA methylation …

[HTML][HTML] Early aberrant DNA methylation events in a mouse model of acute myeloid leukemia

M Sonnet, R Claus, N Becker, M Zucknick, J Petersen… - Genome medicine, 2014 - Springer
Background Aberrant DNA methylation is frequently found in human malignancies including
acute myeloid leukemia (AML). While most studies focus on later disease stages, the onset …