DNA methylation loss in late-replicating domains is linked to mitotic cell division
DNA methylation loss occurs frequently in cancer genomes, primarily within lamina-
associated, late-replicating regions termed partially methylated domains (PMDs). We …
associated, late-replicating regions termed partially methylated domains (PMDs). We …
Detection and interpretation of altered methylation patterns in cancer cells
T Ushijima - Nature Reviews Cancer, 2005 - nature.com
Epigenetic alterations, such as abnormal DNA-methylation patterns, are associated with
many human tumour types. New techniques have been developed to perform genome-wide …
many human tumour types. New techniques have been developed to perform genome-wide …
Identification of driver and passenger DNA methylation in cancer by epigenomic analysis
S Kalari, GP Pfeifer - Advances in genetics, 2010 - Elsevier
Human cancer genomes are characterized by widespread aberrations in DNA methylation
patterns including DNA hypomethylation of mostly repetitive sequences and …
patterns including DNA hypomethylation of mostly repetitive sequences and …
The DNA methylation landscape of glioblastoma disease progression shows extensive heterogeneity in time and space
Glioblastoma is characterized by widespread genetic and transcriptional heterogeneity, yet
little is known about the role of the epigenome in glioblastoma disease progression. Here …
little is known about the role of the epigenome in glioblastoma disease progression. Here …
Dissecting complex epigenetic alterations in breast cancer using CpG island microarrays
It is now clear that aberrant DNA methylation observed in cancer cells is not restricted to a
few CpG islands, but affects multiple loci. When this epigenetic event occurs at the 5′-end …
few CpG islands, but affects multiple loci. When this epigenetic event occurs at the 5′-end …
Epigenomic analysis of Alu repeats in human ependymomas
H Xie, M Wang, MF Bonaldo… - Proceedings of the …, 2010 - National Acad Sciences
Global loss of DNA methylation has been known for decades as an epigenomic aberration
associated with carcinogenesis and cancer progression. Loss of DNA methylation affects …
associated with carcinogenesis and cancer progression. Loss of DNA methylation affects …
IDH1 mutation is sufficient to establish the glioma hypermethylator phenotype
Both genome-wide genetic and epigenetic alterations are fundamentally important for the
development of cancers, but the interdependence of these aberrations is poorly understood …
development of cancers, but the interdependence of these aberrations is poorly understood …
Distal CpG islands can serve as alternative promoters to transcribe genes with silenced proximal promoters
S Sarda, A Das, C Vinson, S Hannenhalli - Genome research, 2017 - genome.cshlp.org
DNA methylation at the promoter of a gene is presumed to render it silent, yet a sizable
fraction of genes with methylated proximal promoters exhibit elevated expression. Here, we …
fraction of genes with methylated proximal promoters exhibit elevated expression. Here, we …
A bird's eye view of global methylation
Restriction landmark genomic scanning applied to a broad variety of cancer types can
disclose tumour-specific and tumour-type–specific global methylation profiles. This and …
disclose tumour-specific and tumour-type–specific global methylation profiles. This and …
Clustering of hypermethylated genes in neuroblastoma
MM Van Noesel, S Van Bezouw… - Genes …, 2003 - Wiley Online Library
CpG‐island hypermethylation of gene promoters is a frequent mechanism for gene
inactivation in tumors. Many neuroblastomas have hypermethylation and down‐regulation of …
inactivation in tumors. Many neuroblastomas have hypermethylation and down‐regulation of …