Sarcoma classification by DNA methylation profiling

C Koelsche, D Schrimpf, D Stichel, M Sill… - Nature …, 2021 - nature.com
Sarcomas are malignant soft tissue and bone tumours affecting adults, adolescents and
children. They represent a morphologically heterogeneous class of tumours and some …

Integrative DNA methylation and gene expression analysis in high-grade soft tissue sarcomas

M Renner, T Wolf, H Meyer, W Hartmann, R Penzel… - Genome biology, 2013 - Springer
Background High-grade soft tissue sarcomas are a heterogeneous, complex group of
aggressive malignant tumors showing mesenchymal differentiation. Recently, soft tissue …

Methylation classifiers: Brain tumors, sarcomas, and what's next

C Koelsche, A von Deimling - Genes, Chromosomes and …, 2022 - Wiley Online Library
Tumor classification has evolved over the last decades with technical progress contributing
much to our current concepts. Among diagnostic hallmarks, novelties were immunostaining …

Invited review: DNA methylation‐based classification of paediatric brain tumours

E Perez, D Capper - Neuropathology and applied …, 2020 - Wiley Online Library
DNA methylation‐based machine learning algorithms represent powerful diagnostic tools
that are currently emerging for several fields of tumour classification. For various reasons …

Genome-wide DNA methylation patterns reveal clinically relevant predictive and prognostic subtypes in human osteosarcoma

CE Lietz, ET Newman, AD Kelly, DH Xiang… - Communications …, 2022 - nature.com
Aberrant methylation of genomic DNA has been reported in many cancers. Specific DNA
methylation patterns have been shown to provide clinically useful prognostic information …

DNA methylation profiling: an emerging paradigm for cancer diagnosis

A Papanicolau-Sengos, K Aldape - Annual Review of Pathology …, 2022 - annualreviews.org
Histomorphology has been a mainstay of cancer diagnosis in anatomic pathology for many
years. DNA methylation profiling is an additional emerging tool that will serve as an adjunct …

Tumour class prediction and discovery by microarray-based DNA methylation analysis

P Adorján, J Distler, E Lipscher, F Model… - Nucleic acids …, 2002 - academic.oup.com
Aberrant DNA methylation of CpG sites is among the earliest and most frequent alterations
in cancer. Several studies suggest that aberrant methylation occurs in a tumour type-specific …

DNA methylation-based classification of central nervous system tumours

D Capper, DTW Jones, M Sill, V Hovestadt, D Schrimpf… - Nature, 2018 - nature.com
Accurate pathological diagnosis is crucial for optimal management of patients with cancer.
For the approximately 100 known tumour types of the central nervous system …

Practical implementation of DNA methylation and copy-number-based CNS tumor diagnostics: the Heidelberg experience

D Capper, D Stichel, F Sahm, DTW Jones… - Acta …, 2018 - Springer
Recently, we described a machine learning approach for classification of central nervous
system tumors based on the analysis of genome-wide DNA methylation patterns [6]. Here …

[HTML][HTML] Array-based DNA-methylation profiling in sarcomas with small blue round cell histology provides valuable diagnostic information

C Koelsche, W Hartmann, D Schrimpf, D Stichel… - Modern pathology, 2018 - Elsevier
Undifferentiated solid tumors with small blue round cell histology and expression of CD99
mostly resemble Ewing sarcoma. However, they also may include other tumors such as …