An integrated resource for genome-wide identification and analysis of human tissue-specific differentially methylated regions (tDMRs)
We report a novel resource (m ethylation p rofiles of D NA, or mPod) for human genome-
wide tissue-specific DNA methylation profiles. mPod consists of three fully integrated parts …
wide tissue-specific DNA methylation profiles. mPod consists of three fully integrated parts …
Large-scale structure of genomic methylation patterns
RA Rollins, F Haghighi, JR Edwards, R Das… - Genome …, 2006 - genome.cshlp.org
The mammalian genome depends on patterns of methylated cytosines for normal function,
but the relationship between genomic methylation patterns and the underlying sequence is …
but the relationship between genomic methylation patterns and the underlying sequence is …
[HTML][HTML] Genetic analysis of DNA methylation and gene expression levels in whole blood of healthy human subjects
KR van Eijk, S de Jong, MPM Boks, T Langeveld… - BMC genomics, 2012 - Springer
Background The predominant model for regulation of gene expression through DNA
methylation is an inverse association in which increased methylation results in decreased …
methylation is an inverse association in which increased methylation results in decreased …
Epigenetics and evolution
Epigenetic mechanisms traditionally have been studied in the domains of development and
disease, but they may also play important roles in ecological and evolutionary processes. In …
disease, but they may also play important roles in ecological and evolutionary processes. In …
Genomics of CpG methylation in developing and developed zebrafish
DM McGaughey, HO Abaan, RM Miller… - G3: Genes …, 2014 - academic.oup.com
DNA methylation is a dynamic process through which specific chromatin modifications can
be stably transmitted from parent to daughter cells. A large body of work has suggested that …
be stably transmitted from parent to daughter cells. A large body of work has suggested that …
Epigenetics: the DNA methylation profile of tissue-dependent and differentially methylated regions in cells
J Ohgane, S Yagi, K Shiota - Placenta, 2008 - Elsevier
Methylation of DNA, which occurs at cytosines of CpG sequences, is a unique chemical
modification of the vertebrate genome. Methylation patterns can be copied to daughter DNA …
modification of the vertebrate genome. Methylation patterns can be copied to daughter DNA …
Methylation of genomes and genes at the invertebrate-vertebrate boundary
S Tweedie, J Charlton, V Clark… - Molecular and cellular …, 1997 - Taylor & Francis
Patterns of DNA methylation in animal genomes are known to vary from an apparent
absence of modified bases, via methylation of a minor fraction of the genome, to genome …
absence of modified bases, via methylation of a minor fraction of the genome, to genome …
[HTML][HTML] Genome-wide analysis of DNA methylation dynamics during early human development
H Okae, H Chiba, H Hiura, H Hamada, A Sato… - PLoS …, 2014 - journals.plos.org
DNA methylation is globally reprogrammed during mammalian preimplantation
development, which is critical for normal development. Recent reduced representation …
development, which is critical for normal development. Recent reduced representation …
Methods in DNA methylation profiling
Metastable and somatically heritable patterns of DNA methylation provide an important level
of genomic regulation. In this article, we review methods for analyzing these genome-wide …
of genomic regulation. In this article, we review methods for analyzing these genome-wide …
Patterns of DNA methylation in animals: an ecotoxicological perspective
JA Head - Integrative and Comparative Biology, 2014 - academic.oup.com
DNA methylation refers to the addition of a methyl group to nucleotides within DNA. As with
other epigenetic endpoints, patterns of DNA methylation are susceptible to alterations due to …
other epigenetic endpoints, patterns of DNA methylation are susceptible to alterations due to …