Aberrant CpG-island methylation has non-random and tumour-type–specific patterns

JF Costello, MC Frühwald, DJ Smiraglia, LJ Rush… - Nature …, 2000 - nature.com
CpG islands frequently contain gene promoters or exons 1 and are usually unmethylated in
normal cells 1, 2, 3. Methylation of CpG islands is associated with delayed replication …

Evidence for an instructive mechanism of de novo methylation in cancer cells

I Keshet, Y Schlesinger, S Farkash, E Rand, M Hecht… - Nature …, 2006 - nature.com
DNA methylation has a role in the regulation of gene expression during normal mammalian
development but can also mediate epigenetic silencing of CpG island genes in cancer and …

Chromosome-wide and promoter-specific analyses identify sites of differential DNA methylation in normal and transformed human cells

M Weber, JJ Davies, D Wittig, EJ Oakeley, M Haase… - Nature …, 2005 - nature.com
Cytosine methylation is required for mammalian development and is often perturbed in
human cancer. To determine how this epigenetic modification is distributed in the genomes …

Methylation profiling of CpG islands in human breast cancer cells

THM Huang, MR Perry, DE Laux - Human molecular genetics, 1999 - academic.oup.com
CpG island hypermethylation is known to be associated with gene silencing in cancer. This
epigenetic event is generally accepted as a stochastic process in tumor cells resulting from …

Predicting aberrant CpG island methylation

FA Feltus, EK Lee, JF Costello… - Proceedings of the …, 2003 - National Acad Sciences
Epigenetic silencing associated with aberrant methylation of promoter region CpG islands is
one mechanism leading to loss of tumor suppressor function in human cancer. Profiling of …

Susceptibility of Nonpromoter CpG Islands to De Novo Methylation in Normal and Neoplastic Cells

C Nguyen, G Liang, TDT Nguyen… - Journal of the …, 2001 - academic.oup.com
Background: Many cancers display alterations in methylation patterns of CpG islands—
stretches of DNA rich in CpG dinucleotides often associated with gene promoters that are …

CpG island methylator phenotype in colorectal cancer

M Toyota, N Ahuja, M Ohe-Toyota… - Proceedings of the …, 1999 - National Acad Sciences
Aberrant methylation of promoter region CpG islands is associated with transcriptional
inactivation of tumor-suppressor genes in neoplasia. To understand global patterns of CpG …

Excessive CpG island hypermethylation in cancer cell lines versus primary human malignancies

DJ Smiraglia, LJ Rush, MC Frühwald… - Human molecular …, 2001 - academic.oup.com
Cancer cell lines are widely used in many types of cancer research, including studies aimed
at understanding DNA hypermethylation of gene promoters in cancer. Hypermethylation of …

Methylation-specific PCR: a novel PCR assay for methylation status of CpG islands.

JG Herman, JR Graff, S Myöhänen… - Proceedings of the …, 1996 - National Acad Sciences
Precise mapping of DNA methylation patterns in CpG islands has become essential for
understanding diverse biological processes such as the regulation of imprinted genes, X …

Genome-wide profiling of CpG methylation identifies novel targets of aberrant hypermethylation in myeloid leukemia

C Gebhard, L Schwarzfischer, TH Pham, E Schilling… - Cancer research, 2006 - AACR
The methylation of CpG islands is associated with transcriptional repression and, in cancer,
leads to the abnormal silencing of tumor suppressor genes. Because aberrant …