Tet oxidizes thymine to 5-hydroxymethyluracil in mouse embryonic stem cell DNA

T Pfaffeneder, F Spada, M Wagner… - Nature chemical …, 2014 - nature.com
Ten eleven translocation (Tet) enzymes oxidize the epigenetically important DNA base 5-
methylcytosine (mC) stepwise to 5-hydroxymethylcytosine (hmC), 5-formylcytosine and 5 …

Distinct roles of the methylcytosine oxidases Tet1 and Tet2 in mouse embryonic stem cells

Y Huang, L Chavez, X Chang… - Proceedings of the …, 2014 - National Acad Sciences
Dioxygenases of the Ten-Eleven Translocation (TET) family are 5-methylcytosine oxidases
that convert 5-methylcytosine (5mC) to 5-hydroxymethylcytosine (5hmC) and further …

Tet-mediated formation of 5-hydroxymethylcytosine in RNA

L Fu, CR Guerrero, N Zhong, NJ Amato… - Journal of the …, 2014 - ACS Publications
Oxidation of 5-methylcytosine in DNA by ten-eleven translocation (Tet) family of enzymes
has been demonstrated to play a significant role in epigenetic regulation in mammals. We …

Charting oxidized methylcytosines at base resolution

H Wu, Y Zhang - Nature structural & molecular biology, 2015 - nature.com
DNA cytosine methylation is a key epigenetic mark that is required for normal mammalian
development. Iterative oxidation of 5-methylcytosine (5mC) by the TET family of DNA …

Mutations along a TET2 active site scaffold stall oxidation at 5-hydroxymethylcytosine

MY Liu, H Torabifard, DJ Crawford, JE DeNizio… - Nature chemical …, 2017 - nature.com
Ten-eleven translocation (TET) enzymes catalyze stepwise oxidation of 5-methylcytosine
(mC) to yield 5-hydroxymethylcytosine (hmC) and the rarer bases 5-formylcytosine (fC) and …

Quantitative sequencing of 5-methylcytosine and 5-hydroxymethylcytosine at single-base resolution

MJ Booth, MR Branco, G Ficz, D Oxley, F Krueger… - Science, 2012 - science.org
5-Methylcytosine can be converted to 5-hydroxymethylcytosine (5hmC) in mammalian DNA
by the ten-eleven translocation (TET) enzymes. We introduce oxidative bisulfite sequencing …

TET methylcytosine oxidases: new insights from a decade of research

CWJ Lio, X Yue, IF López-Moyado, M Tahiliani… - Journal of …, 2020 - Springer
In mammals, DNA methyltransferases transfer a methyl group from S-adenosylmethionine to
the 5 position of cytosine in DNA. The product of this reaction, 5-methylcytosine (5mC), has …

Tet-mediated formation of 5-carboxylcytosine and its excision by TDG in mammalian DNA

YF He, BZ Li, Z Li, P Liu, Y Wang, Q Tang, J Ding, Y Jia… - Science, 2011 - science.org
The prevalent DNA modification in higher organisms is the methylation of cytosine to 5-
methylcytosine (5mC), which is partially converted to 5-hydroxymethylcytosine (5hmC) by …

[HTML][HTML] Single-base resolution analysis of 5-formyl and 5-carboxyl cytosine reveals promoter DNA methylation dynamics

F Neri, D Incarnato, A Krepelova, S Rapelli, F Anselmi… - Cell reports, 2015 - cell.com
Ten eleven translocation (Tet) proteins oxidize 5-methylcytosine (5mC) to 5-
hydroxymethylcytosine (5hmC), 5-formylcytosine (5fC), and 5-carboxylcytosine (5caC). 5fC …

Tet proteins can convert 5-methylcytosine to 5-formylcytosine and 5-carboxylcytosine

S Ito, L Shen, Q Dai, SC Wu, LB Collins, JA Swenberg… - Science, 2011 - science.org
5-methylcytosine (5mC) in DNA plays an important role in gene expression, genomic
imprinting, and suppression of transposable elements. 5mC can be converted to 5 …