Genomic insights into cancer-associated aberrant CpG island hypermethylation

D Sproul, RR Meehan - Briefings in functional genomics, 2013 - academic.oup.com
Carcinogenesis is thought to occur through a combination of mutational and epimutational
events that disrupt key pathways regulating cellular growth and division. The DNA …

Genome-wide CpG island methylation and intergenic demethylation propensities vary among different tumor sites

ST Lee, JL Wiemels - Nucleic acids research, 2016 - academic.oup.com
The epigenetic landscape of cancer includes both focal hypermethylation and broader
hypomethylation in a genome-wide manner. By means of a comprehensive genomic …

[HTML][HTML] Direct ChIP-bisulfite sequencing reveals a role of H3K27me3 mediating aberrant hypermethylation of promoter CpG islands in cancer cells

F Gao, G Ji, Z Gao, X Han, M Ye, Z Yuan, H Luo… - Genomics, 2014 - Elsevier
The model describing that aberrant CpG island (CGI) methylation leads to repression of
tumour suppressor genes in cancers has been influential, but it remains unclear how such …

Altered methylation patterns in cancer cell genomes: cause or consequence?

S Baylin, TH Bestor - Cancer cell, 2002 - cell.com
CpG islands are associated with at least half of all cellular genes and are normally
methylation-free. Dense methylation of cytosine residues within islands causes strong and …

Changes in correlation between promoter methylation and gene expression in cancer

M Moarii, V Boeva, JP Vert, F Reyal - BMC genomics, 2015 - Springer
Background Methylation of high-density CpG regions known as CpG Islands (CGIs) has
been widely described as a mechanism associated with gene expression regulation …

Partially methylated domains are hypervariable in breast cancer and fuel widespread CpG island hypermethylation

AB Brinkman, S Nik-Zainal, F Simmer… - Nature …, 2019 - nature.com
Global loss of DNA methylation and CpG island (CGI) hypermethylation are key epigenomic
aberrations in cancer. Global loss manifests itself in partially methylated domains (PMDs) …

Aberrant methylations in cancer cells: where do they come from?

T Ushijima, E Okochi‐Takada - Cancer Science, 2005 - Wiley Online Library
Cancer epigenetics is rapidly moving into a translational phase, and knowledge on how
aberrant DNA methylation is induced is becoming important. Aging, chronic inflammation …

CpG island hypermethylation and tumor suppressor genes: a booming present, a brighter future

M Esteller - Oncogene, 2002 - nature.com
We have come a long way since the first reports of the existence of aberrant DNA
methylation in human cancer. Hypermethylation of CpG islands located in the promoter …

Predicting aberrant CpG island methylation

FA Feltus, EK Lee, JF Costello… - Proceedings of the …, 2003 - National Acad Sciences
Epigenetic silencing associated with aberrant methylation of promoter region CpG islands is
one mechanism leading to loss of tumor suppressor function in human cancer. Profiling of …

Hypermethylation of gene body CpG islands predicts high dosage of functional oncogenes in liver cancer

M Arechederra, F Daian, A Yim, SK Bazai… - Nature …, 2018 - nature.com
Epigenetic modifications such as aberrant DNA methylation reshape the gene expression
repertoire in cancer. Here, we used a clinically relevant hepatocellular carcinoma (HCC) …