DNA methylation and gene expression in Mimulus guttatus

JM Colicchio, F Miura, JK Kelly, T Ito, LC Hileman - BMC genomics, 2015 - Springer
Background The presence of methyl groups on cytosine nucleotides across an organism's
genome (methylation) is a major regulator of genome stability, crossing over, and gene …

Parental experience modifies the Mimulus methylome

JM Colicchio, JK Kelly, LC Hileman - BMC genomics, 2018 - Springer
Background Transgenerational plasticity occurs when the environmental experience of an
organism modifies the growth and development of its progeny. Leaf damage in Mimulus …

Conservation and divergence of methylation patterning in plants and animals

S Feng, SJ Cokus, X Zhang, PY Chen… - Proceedings of the …, 2010 - National Acad Sciences
Cytosine DNA methylation is a heritable epigenetic mark present in many eukaryotic
organisms. Although DNA methylation likely has a conserved role in gene silencing, the …

Deciphering a methylome: what can we read into patterns of DNA methylation?

KB Flores, GV Amdam - Journal of Experimental Biology, 2011 - journals.biologists.com
The methylation of cytosines within cytosine–guanine (CG) dinucleotides is an epigenetic
mark that can modify gene transcription. With the advent of high-throughput sequencing, it is …

Conservation and divergence in eukaryotic DNA methylation

T Lee, J Zhai, BC Meyers - Proceedings of the National …, 2010 - National Acad Sciences
Cytosine methylation is a com-mon DNA modification found in most eukaryotic organisms
including plants, animals, and fungi (1, 2). The addition of a methyl group to cytosine …

Functional conservation of DNA methylation in the pea aphid and the honeybee

BG Hunt, JA Brisson, SV Yi… - Genome biology and …, 2010 - academic.oup.com
DNA methylation is a fundamental epigenetic mark known to have wide-ranging effects on
gene regulation in a variety of animal taxa. Comparative genomic analyses can help …

Genome-wide DNA methylomes from discrete developmental stages reveal the predominance of non-CpG methylation in Tribolium castaneum

X Song, F Huang, J Liu, C Li, S Gao, W Wu… - DNA …, 2017 - academic.oup.com
Cytosine DNA methylation is a vital epigenetic regulator of eukaryotic development. Whether
this epigenetic modification occurs in Tribolium castaneum has been controversial, its …

Conservation and divergence of DNA methylation in eukaryotes: new insights from single base-resolution DNA methylomes

Z Su, L Han, Z Zhao - Epigenetics, 2011 - Taylor & Francis
DNA methylation is one of the most important heritable epigenetic modifications of the
genome and is involved in the regulation of many cellular processes. Aberrant DNA …

Genome-wide association between DNA methylation and alternative splicing in an invertebrate

K Flores, F Wolschin, JJ Corneveaux, AN Allen… - BMC genomics, 2012 - Springer
Background Gene bodies are the most evolutionarily conserved targets of DNA methylation
in eukaryotes. However, the regulatory functions of gene body DNA methylation remain …

Divergent DNA methylation signatures of juvenile seedlings, grafts and adult apple trees

A Perrin, N Daccord, D Roquis, JM Celton, E Vergne… - Epigenomes, 2020 - mdpi.com
The vast majority of previous studies on epigenetics in plants have centered on the study of
inheritance of DNA methylation patterns in annual plants. In contrast, perennial plants may …