TERT promoter mutation and aberrant hypermethylation are associated with elevated expression in medulloblastoma and characterise the majority of non-infant SHH …

JC Lindsey, EC Schwalbe, S Potluri, S Bailey… - Acta …, 2014 - Springer
Janet C. Lindsey· Ed. C. Schwalbe· Sandeep Potluri· Simon Bailey· Daniel Williamson·
Steven C. Clifford received: 2 November 2013/revised: 28 November 2013/Accepted: 29 …

[HTML][HTML] Genome-wide methylation analysis of human colon cancer reveals similar hypo-and hypermethylation at conserved tissue-specific CpG island shores

RA Irizarry, C Ladd-Acosta, B Wen, Z Wu… - Nature …, 2009 - ncbi.nlm.nih.gov
Alterations in DNA methylation (DNAm) in cancer have been known for 25 years, including
hypomethylation of oncogenes and hypermethylation of tumor suppressor genes 1 …

Minimal methylation classifier (MIMIC): A novel method for derivation and rapid diagnostic detection of disease-associated DNA methylation signatures

EC Schwalbe, D Hicks, G Rafiee, M Bashton… - Scientific Reports, 2017 - nature.com
Rapid and reliable detection of disease-associated DNA methylation patterns has major
potential to advance molecular diagnostics and underpin research investigations. We …

Global analysis of the medulloblastoma epigenome identifies disease-subgroup-specific inactivation of COL1A2

JA Anderton, JC Lindsey, ME Lusher… - Neuro …, 2008 - academic.oup.com
Candidate gene investigations have indicated a significant role for epigenetic events in the
pathogenesis of medulloblastoma, the most common malignant brain tumor of childhood. To …

Gliomas display distinct sex-based differential methylation patterns based on molecular subtype

ML Johansen, LC Stetson, V Vadmal… - Neuro-Oncology …, 2020 - academic.oup.com
Background Gliomas are the most common type of primary brain tumor and one of many
cancers where males are diagnosed with greater frequency than females. However, little is …

Transitioning from genotypes to epigenotypes: why the time has come for medulloblastoma epigenomics

NV Batora, D Sturm, DTW Jones, M Kool, SM Pfister… - Neuroscience, 2014 - Elsevier
Recent advances in genomic technologies have allowed for tremendous progress in our
understanding of the biology underlying medulloblastoma, a malignant childhood brain …

MethyLight: a high-throughput assay to measure DNA methylation

CA Eads, KD Danenberg, K Kawakami… - Nucleic acids …, 2000 - academic.oup.com
Cytosine-5 DNA methylation occurs in the context of CpG dinucleotides in vertebrates.
Aberrant methylation of CpG islands in human tumors has been shown to cause …

DNA methylation in neuroblastic tumors

B Banelli, A Di Vinci, I Gelvi, I Casciano, G Allemanni… - Cancer letters, 2005 - Elsevier
Epigenetic modifications and particularly the methylation of cytosines 5′ of guanine
residues (CpGs) in gene promoter regions is an essential regulatory mechanism for normal …

Genome-scale DNA methylation maps of pluripotent and differentiated cells

A Meissner, TS Mikkelsen, H Gu, M Wernig, J Hanna… - Nature, 2008 - nature.com
DNA methylation is essential for normal development,, and has been implicated in many
pathologies including cancer,. Our knowledge about the genome-wide distribution of DNA …

DNA methylation loss in late-replicating domains is linked to mitotic cell division

W Zhou, HQ Dinh, Z Ramjan, DJ Weisenberger… - Nature …, 2018 - nature.com
DNA methylation loss occurs frequently in cancer genomes, primarily within lamina-
associated, late-replicating regions termed partially methylated domains (PMDs). We …