Current advances in DNA methylation analysis methods

E Khodadadi, L Fahmideh, E Khodadadi… - BioMed Research …, 2021 - Wiley Online Library
DNA methylation is one of the epigenetic changes, which plays a major role in regulating
gene expression and, thus, many biological processes and diseases. There are several …

[HTML][HTML] Whole genome DNA methylation: beyond genes silencing

R Tirado-Magallanes, K Rebbani, R Lim, S Pradhan… - Oncotarget, 2017 - ncbi.nlm.nih.gov
The combination of DNA bisulfite treatment with high-throughput sequencing technologies
has enabled investigation of genome-wide DNA methylation at near base pair level …

[HTML][HTML] Focused, high accuracy 5-methylcytosine quantitation with base resolution by benchtop next-generation sequencing

DR Masser, AS Berg, WM Freeman - Epigenetics & chromatin, 2013 - Springer
Background The growing interest in the role of epigenetic modifications in human health and
disease has led to the development of next-generation sequencing methods for whole …

[HTML][HTML] DNA methylation: a historical perspective

AL Mattei, N Bailly, A Meissner - Trends in Genetics, 2022 - cell.com
In 1925, 5-methylcytosine was first reported in bacteria. However, its biological importance
was not intuitive for several decades. After this initial lag, the ubiquitous presence of this …

Methyl-DNA immunoprecipitation (MeDIP): hunting down the DNA methylome

FV Jacinto, E Ballestar, M Esteller - Biotechniques, 2008 - Taylor & Francis
One of the most challenging projects in the field of epigenetics is the generation of detailed
functional maps of DNA methylation in different cell and tissue types in normal and disease …

[HTML][HTML] Design, measurement and processing of region-specific DNA methylation assays: the mass spectrometry-based method EpiTYPER

HED Suchiman, RC Slieker, D Kremer… - Frontiers in …, 2015 - frontiersin.org
EpiTYPER® is a mass spectrometry-based bisulfite sequencing method that enables region-
specific DNA methylation analysis in a quantitative and high-throughput fashion. The …

[HTML][HTML] DNA methylation data by sequencing: experimental approaches and recommendations for tools and pipelines for data analysis

I Rauluseviciute, F Drabløs, MB Rye - Clinical epigenetics, 2019 - Springer
Sequencing technologies have changed not only our approaches to classical genetics, but
also the field of epigenetics. Specific methods allow scientists to identify novel genome-wide …

MBD-isolated Genome Sequencing provides a high-throughput and comprehensive survey of DNA methylation in the human genome

D Serre, BH Lee, AH Ting - Nucleic acids research, 2010 - academic.oup.com
DNA methylation is an epigenetic modification involved in both normal developmental
processes and disease states through the modulation of gene expression and the …

Dynamic DNA methylation across diverse human cell lines and tissues

KE Varley, J Gertz, KM Bowling, SL Parker… - Genome …, 2013 - genome.cshlp.org
As studies of DNA methylation increase in scope, it has become evident that methylation has
a complex relationship with gene expression, plays an important role in defining cell types …

Latest techniques to study DNA methylation

Q Gouil, A Keniry - Essays in biochemistry, 2019 - portlandpress.com
Bisulfite sequencing is a powerful technique to detect 5-methylcytosine in DNA that has
immensely contributed to our understanding of epigenetic regulation in plants and animals …