DNA methylation profiles of CpG islands for cellular differentiation and development in mammals

K Shiota - Cytogenetic and genome research, 2004 - karger.com
DNA methylation has been implicated in mammalian development. Transcription units
contain CpG islands, but expression of CpG island associated genes in normal tissues was …

Association of tissue-specific differentially methylated regions (TDMs) with differential gene expression

F Song, JF Smith, MT Kimura… - Proceedings of the …, 2005 - National Acad Sciences
Early studies proposed that DNA methylation could have a role in regulating gene
expression during development [Riggs, AD (1975) Cytogenet. Cell Genet. 14, 9–25] …

Genome-wide analysis of DNA methylation status of CpG islands in embryoid bodies, teratomas, and fetuses

M Kremenskoy, Y Kremenska, J Ohgane… - Biochemical and …, 2003 - Elsevier
Differentiation of embryonic stem (ES) cells into embryoid bodies (EBs) provides an in vitro
system for the study of early lineage determination during mammalian development. We …

CpG islands

F Antequera, A Bird - DNA methylation: molecular biology and biological …, 1993 - Springer
DNA methylation is a conspicuous feature of vertebrate genomes. Approximately 4% of total
cytosines are methylated, representing about 5× 10 7 5-methylcytosine (5-mC) residues per …

High levels of de novo methylation and altered chromatin structure at CpG islands in cell lines

F Antequera, J Boyes, A Bird - Cell, 1990 - cell.com
CpG islands are normally methylation free in cells of the animal, even when the associated
gene is transcriptionally silent. In mouse NIH 3T3 and L cells, however, over half of the …

DNA methylation of intragenic CpG islands depends on their transcriptional activity during differentiation and disease

DM Jeziorska, RJS Murray… - Proceedings of the …, 2017 - National Acad Sciences
The human genome contains∼ 30,000 CpG islands (CGIs). While CGIs associated with
promoters nearly always remain unmethylated, many of the∼ 9,000 CGIs lying within gene …

Epigenetic marks by DNA methylation specific to stem, germ and somatic cells in mice

K Shiota, Y Kogo, J Ohgane, T Imamura… - Genes to …, 2002 - Wiley Online Library
Background: DNA methylation is involved in many gene functions such as gene‐silencing, X‐
inactivation, imprinting and stability of the gene. We recently found that some CpG islands …

Chromosome-wide and promoter-specific analyses identify sites of differential DNA methylation in normal and transformed human cells

M Weber, JJ Davies, D Wittig, EJ Oakeley, M Haase… - Nature …, 2005 - nature.com
Cytosine methylation is required for mammalian development and is often perturbed in
human cancer. To determine how this epigenetic modification is distributed in the genomes …

Dynamics of DNA methylation during development

M Brandeis, M Ariel, H Cedar - Bioessays, 1993 - Wiley Online Library
DNA methylation plays a role in the repression of gene expression in animal cells. In the
mouse preimplantation embryo, most genes are unmethylated but a wave of de novo …

The DNA methylation paradox

PA Jones - Trends in genetics, 1999 - cell.com
The methylation of CpG islands is often equated with transcriptional inactivity and there is
overwhelming evidence that this is the case for islands located in gene promoters. Such …