Understanding and editing the zebrafish genome

GK Varshney, R Sood, SM Burgess - Advances in genetics, 2015 - Elsevier
In the last two decades, zebrafish has become one of the fastest growing model organisms
in terms of publications, however it has been plagued with the absence of a key tool in the …

Genome editing using artificial site‐specific nucleases in zebrafish

Y Hisano, S Ota, A Kawahara - Development, growth & …, 2014 - Wiley Online Library
Zebrafish is a model vertebrate suitable for genetic analysis. Forward genetic analysis via
chemical mutagenesis screening has established a variety of zebrafish mutants that are …

[HTML][HTML] Fishing for understanding: Unlocking the zebrafish gene editor's toolbox

BW Simone, G Martínez-Gálvez, Z WareJoncas… - Methods, 2018 - Elsevier
The rapid growth of the field of gene editing can largely be attributed to the discovery and
optimization of designer endonucleases. These include zinc finger nucleases (ZFNs) …

The zebrafish genome editing toolkit

H Ata, KJ Clark, SC Ekker - Methods in cell biology, 2016 - Elsevier
Zebrafish (Danio rerio) is a unique model organism at the functional intersection between a
high fecundity and conserved vertebrate physiology while being amenable to a multitude of …

A TALE of two nucleases: gene targeting for the masses?

KJ Clark, DF Voytas, SC Ekker - Zebrafish, 2011 - liebertpub.com
Genome editing appears poised to enter an exciting new era. Targeted double-stranded
breaks due to custom restriction enzymes are powerful nucleating events for the induction of …

Using engineered endonucleases to create knockout and knockin zebrafish models

VM Bedell, SC Ekker - Chromosomal Mutagenesis, 2015 - Springer
Over the last few years, the technology to create targeted knockout and knockin zebrafish
animals has exploded. We have gained the ability to create targeted knockouts through the …

TALEN-mediated mutagenesis and genome editing

ACH Ma, Y Chen, PR Blackburn, SC Ekker - Zebrafish: Methods and …, 2016 - Springer
Transcription activator-like effectors (TALEs) are important genomic tools with customizable
DNA-binding motifs for locus-specific modifications. In particular, TALE nucleases or …

CRISPR/Cas9 and TALEN-mediated knock-in approaches in zebrafish

TO Auer, F Del Bene - Methods, 2014 - Elsevier
The targeted introduction of mutations utilizing sequence specific transcription activator-like
effector nucleases (TALENs) and the clustered regularly interspaced short palindromic …

A comprehensive review of indel detection methods for identification of zebrafish knockout mutants generated by genome-editing nucleases

B Carrington, K Bishop, R Sood - Genes, 2022 - mdpi.com
The use of zebrafish in functional genomics and disease modeling has become popular due
to the ease of targeted mutagenesis with genome editing nucleases, ie, zinc finger …

Targeted chromosomal deletions and inversions in zebrafish

A Gupta, VL Hall, FO Kok, M Shin, JC McNulty… - Genome …, 2013 - genome.cshlp.org
Zinc finger nucleases (ZFNs) and transcription activator-like effector nucleases (TALENs)
provide powerful platforms for genome editing in plants and animals. Typically, a single …