DNA methylation data analysis and its application to cancer research

X Ma, YW Wang, MQ Zhang, AF Gazdar - Epigenomics, 2013 - Taylor & Francis
With the rapid development of genome-wide high-throughput technologies, including
expression arrays, SNP arrays and next-generation sequencing platforms, enormous …

[HTML][HTML] Blood-based DNA methylation signatures in cancer: A systematic review

Y Li, Z Fan, Y Meng, S Liu, H Zhan - … Acta (BBA)-Molecular Basis of Disease, 2023 - Elsevier
DNA methylation profiles are in dynamic equilibrium via the initiation of methylation,
maintenance of methylation and demethylation, which control gene expression and …

DNA methylation: a timeline of methods and applications

A Harrison, A Parle-McDermott - Frontiers in genetics, 2011 - frontiersin.org
DNA methylation is a biochemical process where a DNA base, usually cytosine, is
enzymatically methylated at the 5-carbon position. An epigenetic modification associated …

DNA methylation changes associated with cancer risk factors and blood levels of vitamin metabolites in a prospective study

P Vineis, SC Chuang, T Vaissière, C Cuenin… - Epigenetics, 2011 - Taylor & Francis
Aberrant DNA methylation is a major epigenetic mechanism of gene silencing in a wide
range of human cancers. Previous studies on DNA methylation typically used paired tumor …

DNA methylation patterns in cancer: novel prognostic indicators?

MC Frühwald - American Journal of Pharmacogenomics, 2003 - Springer
DNA methylation is an epigenetic phenomenon influencing the normal function of DNA and
its scaffolding proteins. Especially in cancer, aberrant methylation patterns may contribute to …

DNA methylation and cancer: transcriptional regulation, prognostic, and therapeutic perspective

S Bhootra, N Jill, G Shanmugam, S Rakshit, K Sarkar - Medical oncology, 2023 - Springer
DNA methylation is one among the major grounds of cancer progression which is
characterized by the addition of a methyl group to the promoter region of the gene thereby …

Analysis of DNA methylation status in bodily fluids for early detection of cancer

K Yokoi, K Yamashita, M Watanabe - International journal of molecular …, 2017 - mdpi.com
Epigenetic alterations by promoter DNA hypermethylation and gene silencing in cancer
have been reported over the past few decades. DNA hypermethylation has great potential to …

PCR-based methods for detecting single-locus DNA methylation biomarkers in cancer diagnostics, prognostics, and response to treatment

LS Kristensen, LL Hansen - Clinical chemistry, 2009 - academic.oup.com
Background: DNA methylation is a highly characterized epigenetic modification of the
human genome that is implicated in cancer. The altered DNA methylation patterns found in …

Identification of a panel of sensitive and specific DNA methylation markers for squamous cell lung cancer

PP Anglim, JS Galler, MN Koss, JA Hagen, S Turla… - Molecular cancer, 2008 - Springer
Background Lung cancer is the leading cause of cancer death in men and women in the
United States and Western Europe. Over 160,000 Americans die of this disease every year …

MethMarker: user-friendly design and optimization of gene-specific DNA methylation assays

P Schüffler, T Mikeska, A Waha, T Lengauer, C Bock - Genome biology, 2009 - Springer
DNA methylation is a key mechanism of epigenetic regulation that is frequently altered in
diseases such as cancer. To confirm the biological or clinical relevance of such changes …