[HTML][HTML] Allelic skewing of DNA methylation is widespread across the genome

LC Schalkwyk, EL Meaburn, R Smith… - The American Journal of …, 2010 - cell.com
DNA methylation is assumed to be complementary on both alleles across the genome,
although there are exceptions, notably in regions subject to genomic imprinting. We present …

[HTML][HTML] Genome-wide quantification of the effects of DNA methylation on human gene regulation

AJ Lea, CM Vockley, RA Johnston, CA Del Carpio… - elife, 2018 - elifesciences.org
Changes in DNA methylation are involved in development, disease, and the response to
environmental conditions. However, not all regulatory elements are functionally methylation …

[HTML][HTML] Passive and active DNA methylation and the interplay with genetic variation in gene regulation

M Gutierrez-Arcelus, T Lappalainen, SB Montgomery… - elife, 2013 - elifesciences.org
DNA methylation is an essential epigenetic mark whose role in gene regulation and its
dependency on genomic sequence and environment are not fully understood. In this study …

DNA methylation profiling of human chromosomes 6, 20 and 22

F Eckhardt, J Lewin, R Cortese, VK Rakyan, J Attwood… - Nature …, 2006 - nature.com
DNA methylation is the most stable type of epigenetic modification modulating the
transcriptional plasticity of mammalian genomes. Using bisulfite DNA sequencing, we report …

Methylomics of gene expression in human monocytes

Y Liu, J Ding, LM Reynolds, K Lohman… - Human molecular …, 2013 - academic.oup.com
DNA methylation is one of several epigenetic mechanisms that contribute to the regulation of
gene expression; however, the extent to which methylation of CpG dinucleotides correlates …

[HTML][HTML] A novel CpG island set identifies tissue-specific methylation at developmental gene loci

R Illingworth, A Kerr, D DeSousa, H Jørgensen… - PLoS …, 2008 - journals.plos.org
CpG islands (CGIs) are dense clusters of CpG sequences that punctuate the CpG-deficient
human genome and associate with many gene promoters. As CGIs also differ from bulk …

[HTML][HTML] A cross-platform genome-wide comparison of the relationship of promoter DNA methylation to gene expression

JM Plume, SRH Beach, GH Brody, RA Philibert - Frontiers in genetics, 2012 - frontiersin.org
Peripheral mononuclear cell preparations are commonly used as proxies for other tissues in
studies of the role of gene expression and methylation in human disease. Whether changes …

[HTML][HTML] Contribution of genetic variation to transgenerational inheritance of DNA methylation

AF McRae, JE Powell, AK Henders, L Bowdler… - Genome biology, 2014 - Springer
Background Despite the important role DNA methylation plays in transcriptional regulation,
the transgenerational inheritance of DNA methylation is not well understood. The genetic …

[HTML][HTML] Population-specificity of human DNA methylation

HB Fraser, LL Lam, SM Neumann, MS Kobor - Genome biology, 2012 - Springer
Background Ethnic differences in human DNA methylation have been shown for a number of
CpG sites, but the genome-wide patterns and extent of these differences are largely …

Individual variation and longitudinal pattern of genome-wide DNA methylation from birth to the first two years of life

D Wang, X Liu, Y Zhou, H Xie, X Hong, HJ Tsai… - Epigenetics, 2012 - Taylor & Francis
Prenatal development and early childhood are critical periods for establishing the tissue-
specific epigenome, and may have a profound impact on health and disease in later life …