Widespread dynamic DNA methylation in response to biotic stress

RH Dowen, M Pelizzola, RJ Schmitz… - Proceedings of the …, 2012 - National Acad Sciences
Regulation of gene expression by DNA methylation is crucial for defining cellular identities
and coordinating organism-wide developmental programs in many organisms. In plants …

RNAi, DRD1, and Histone Methylation Actively Target Developmentally Important Non-CG DNA Methylation in Arabidopsis

SWL Chan, IR Henderson, X Zhang, G Shah… - PLoS …, 2006 - journals.plos.org
Cytosine DNA methylation protects eukaryotic genomes by silencing transposons and
harmful DNAs, but also regulates gene expression during normal development. Loss of CG …

The CLASSY family controls tissue-specific DNA methylation patterns in Arabidopsis

M Zhou, C Coruh, G Xu, LM Martins… - Nature …, 2022 - nature.com
DNA methylation shapes the epigenetic landscape of the genome, plays critical roles in
regulating gene expression, and ensures transposon silencing. As is evidenced by the …

Methylation and demethylation of the Arabidopsis genome

IJ Furner, M Matzke - Current opinion in plant biology, 2011 - Elsevier
The primary sequence of the genome is broadly constant and superimposed upon that
constancy is the postreplicative modification of a small number of cytosine residues to 5 …

DNA methylation in plants

EJ Finnegan, RK Genger, WJ Peacock… - Annual review of …, 1998 - annualreviews.org
▪ Abstract Methylation of cytosine residues in DNA provides a mechanism of gene control.
There are two classes of methyltransferase in Arabidopsis; one has a carboxy-terminal …

Repeat elements and the Arabidopsis DNA methylation landscape

FK Teixeira, V Colot - Heredity, 2010 - nature.com
DNA methylation is an epigenetic mark that has key roles in the control of genome activity in
plants and mammals. It is critical for the stable silencing of repeat elements and is also …

Evolutionary patterns of genic DNA methylation vary across land plants

S Takuno, JH Ran, BS Gaut - Nature plants, 2016 - nature.com
Little is known about patterns of genic DNA methylation across the plant kingdom or about
the evolutionary processes that shape them. To characterize gene-body methylation (gbM) …

DNA cytosine methylation in plant development

M Zhang, JN Kimatu, K Xu, B Liu - Journal of Genetics and Genomics, 2010 - Elsevier
Cytosine bases of the nuclear genome in higher plants are often extensively methylated.
Cytosine methylation has been implicated in the silencing of both transposable elements …

[HTML][HTML] Comprehensive analysis of silencing mutants reveals complex regulation of the Arabidopsis methylome

H Stroud, MVC Greenberg, S Feng, YV Bernatavichute… - Cell, 2013 - cell.com
Cytosine methylation is involved in various biological processes such as silencing of
transposable elements (TEs) and imprinting. Multiple pathways regulate DNA methylation in …

Interplay between Active Chromatin Marks and RNA-Directed DNA Methylation in Arabidopsis thaliana

MVC Greenberg, A Deleris, CJ Hale, A Liu, S Feng… - PLoS …, 2013 - journals.plos.org
DNA methylation is an epigenetic mark that is associated with transcriptional repression of
transposable elements and protein-coding genes. Conversely, transcriptionally active …