A comprehensive overview of Infinium HumanMethylation450 data processing
S Dedeurwaerder, M Defrance, M Bizet… - Briefings in …, 2014 - academic.oup.com
Infinium HumanMethylation450 beadarray is a popular technology to explore DNA
methylomes in health and disease, and there is a current explosion in the use of this …
methylomes in health and disease, and there is a current explosion in the use of this …
Minfi: a flexible and comprehensive Bioconductor package for the analysis of Infinium DNA methylation microarrays
Abstract Motivation: The recently released Infinium HumanMethylation450 array (the
'450k'array) provides a high-throughput assay to quantify DNA methylation (DNAm) at∼ 450 …
'450k'array) provides a high-throughput assay to quantify DNA methylation (DNAm) at∼ 450 …
Measuring the methylome in clinical samples: improved processing of the Infinium Human Methylation450 BeadChip Array
The Infinium Human Methylation450 BeadChip ArrayTM (Infinium 450K) is an important tool
for studying epigenetic patterns associated with disease. This array offers a high-throughput …
for studying epigenetic patterns associated with disease. This array offers a high-throughput …
[HTML][HTML] Analysis pipelines and packages for Infinium HumanMethylation450 BeadChip (450k) data
TJ Morris, S Beck - Methods, 2015 - Elsevier
Abstract The Illumina HumanMethylation450 BeadChip has become a popular platform for
interrogating DNA methylation in epigenome-wide association studies (EWAS) and related …
interrogating DNA methylation in epigenome-wide association studies (EWAS) and related …
[HTML][HTML] A framework for analyzing DNA methylation data from Illumina Infinium HumanMethylation450 BeadChip
Z Wang, XL Wu, Y Wang - BMC bioinformatics, 2018 - Springer
Background DNA methylation has been identified to be widely associated to complex
diseases. Among biological platforms to profile DNA methylation in human, the Illumina …
diseases. Among biological platforms to profile DNA methylation in human, the Illumina …
A systematic study of normalization methods for Infinium 450K methylation data using whole-genome bisulfite sequencing data
DNA methylation plays an important role in disease etiology. The Illumina Infinium
HumanMethylation450 (450K) BeadChip is a widely used platform in large-scale …
HumanMethylation450 (450K) BeadChip is a widely used platform in large-scale …
A systematic assessment of normalization approaches for the Infinium 450K methylation platform
The Illumina Infinium HumanMethylation450 BeadChip has emerged as one of the most
popular platforms for genome wide profiling of DNA methylation. While the technology is …
popular platforms for genome wide profiling of DNA methylation. While the technology is …
missMethyl: an R package for analyzing data from Illumina's HumanMethylation450 platform
DNA methylation is one of the most commonly studied epigenetic modifications due to its
role in both disease and development. The Illumina HumanMethylation450 BeadChip is a …
role in both disease and development. The Illumina HumanMethylation450 BeadChip is a …
Validation of DNA methylation profiling in formalin-fixed paraffin-embedded samples using the Infinium HumanMethylation450 Microarray
A formalin-fixed paraffin-embedded (FFPE) sample usually yields highly degraded DNA,
which limits the use of techniques requiring high-quality DNA, such as Infinium Methylation …
which limits the use of techniques requiring high-quality DNA, such as Infinium Methylation …
[HTML][HTML] An evaluation of processing methods for HumanMethylation450 BeadChip data
J Liu, KD Siegmund - BMC genomics, 2016 - Springer
Abstract Background Illumina's HumanMethylation450 arrays provide the most cost-effective
means of high-throughput DNA methylation analysis. As with other types of microarray …
means of high-throughput DNA methylation analysis. As with other types of microarray …