[HTML][HTML] AutoMeDIP-seq: a high-throughput, whole genome, DNA methylation assay

LM Butcher, S Beck - Methods, 2010 - Elsevier
DNA methylation is an epigenetic mark linking DNA sequence and transcription regulation,
and therefore plays an important role in phenotypic plasticity. The ideal whole genome …

Methylome analysis using MeDIP-seq with low DNA concentrations

O Taiwo, GA Wilson, T Morris, S Seisenberger… - Nature protocols, 2012 - nature.com
DNA methylation is an epigenetic mark that has a crucial role in many biological processes.
To understand the functional consequences of DNA methylation on phenotypic plasticity, a …

DNA methylation profiling: comparison of genome-wide sequencing methods and the Infinium Human Methylation 450 Bead Chip

DL Walker, AV Bhagwate, S Baheti, RL Smalley… - …, 2015 - Taylor & Francis
Aims: To compare the performance of four sequence-based and one microarray methods for
DNA methylation profiling. Methods: DNA from two cell lines were profiled by reduced …

Functional DNA methylation differences between tissues, cell types, and across individuals discovered using the M&M algorithm

B Zhang, Y Zhou, N Lin, RF Lowdon, C Hong… - Genome …, 2013 - genome.cshlp.org
DNA methylation plays key roles in diverse biological processes such as X chromosome
inactivation, transposable element repression, genomic imprinting, and tissue-specific gene …

[HTML][HTML] Genome-wide mapping of DNA methylation: a quantitative technology comparison

C Bock, EM Tomazou, A Brinkman, F Müller… - Nature …, 2010 - ncbi.nlm.nih.gov
DNA methylation is a key component of mammalian gene regulation and the most classical
example of an epigenetic mark. DNA methylation patterns are mitotically heritable and …

Methylated DNA immunoprecipitation and high-throughput sequencing (MeDIP-seq) using low amounts of genomic DNA

MT Zhao, JJ Whyte, GM Hopkins, MD Kirk… - … (Formerly Cloning and …, 2014 - liebertpub.com
DNA modifications, such as methylation and hydroxymethylation, are pivotal players in
modulating gene expression, genomic imprinting, X-chromosome inactivation, and silencing …

Methyl-DNA immunoprecipitation (MeDIP): hunting down the DNA methylome

FV Jacinto, E Ballestar, M Esteller - Biotechniques, 2008 - Taylor & Francis
One of the most challenging projects in the field of epigenetics is the generation of detailed
functional maps of DNA methylation in different cell and tissue types in normal and disease …

Clinical and public health research using methylated DNA immunoprecipitation (MeDIP): a comparison of commercially available kits to examine differential DNA …

P Brebi-Mieville, C Ili-Gangas, P Leal-Rojas… - Epigenetics, 2012 - Taylor & Francis
The methylated DNA immunoprecipitation method (MeDIP) is a genome-wide, high-
resolution approach that detects DNA methylation with oligonucleotide tiling arrays or high …

[HTML][HTML] A Comparison of the Whole Genome Approach of MeDIP-Seq to the Targeted Approach of the Infinium HumanMethylation450 BeadChip® for Methylome …

C Clark, P Palta, CJ Joyce, C Scott, E Grundberg… - PloS one, 2012 - journals.plos.org
DNA methylation is one of the most studied epigenetic marks in the human genome, with the
result that the desire to map the human methylome has driven the development of several …

[HTML][HTML] Assessing the efficiency and significance of Methylated DNA Immunoprecipitation (MeDIP) assays in using in vitro methylated genomic DNA

J Jia, A Pekowska, S Jaeger, T Benoukraf, P Ferrier… - BMC research …, 2010 - Springer
Background DNA methylation contributes to the regulation of gene expression during
development and cellular differentiation. The recently developed Methylated DNA …