CpG methylation is targeted to transcription units in an invertebrate genome
DNA is methylated at the dinucleotide CpG in genomes of a wide range of plants and
animals. Among animals, variable patterns of genomic CpG methylation have been …
animals. Among animals, variable patterns of genomic CpG methylation have been …
Comparative methylomics reveals gene-body H3K36me3 in Drosophila predicts DNA methylation and CpG landscapes in other invertebrates
L Nanty, G Carbajosa, GA Heap, F Ratnieks… - Genome …, 2011 - genome.cshlp.org
In invertebrates that harbor functional DNA methylation enzymatic machinery, gene-bodies
are the primary targets for CpG methylation. However, virtually all other aspects of …
are the primary targets for CpG methylation. However, virtually all other aspects of …
Protection of CpG islands from DNA methylation is DNA-encoded and evolutionarily conserved
DNA methylation is a repressive epigenetic modification that covers vertebrate genomes.
Regions known as CpG islands (CGIs), which are refractory to DNA methylation, are often …
Regions known as CpG islands (CGIs), which are refractory to DNA methylation, are often …
Genome-wide evolutionary analysis of eukaryotic DNA methylation
A Zemach, IE McDaniel, P Silva, D Zilberman - Science, 2010 - science.org
Eukaryotic cytosine methylation represses transcription but also occurs in the bodies of
active genes, and the extent of methylation biology conservation is unclear. We quantified …
active genes, and the extent of methylation biology conservation is unclear. We quantified …
GC skew is a conserved property of unmethylated CpG island promoters across vertebrates
SR Hartono, IF Korf, F Chédin - Nucleic acids research, 2015 - academic.oup.com
GC skew is a measure of the strand asymmetry in the distribution of guanines and cytosines.
GC skew favors R-loops, a type of three stranded nucleic acid structures that form upon …
GC skew favors R-loops, a type of three stranded nucleic acid structures that form upon …
Conservation and divergence of methylation patterning in plants and animals
Cytosine DNA methylation is a heritable epigenetic mark present in many eukaryotic
organisms. Although DNA methylation likely has a conserved role in gene silencing, the …
organisms. Although DNA methylation likely has a conserved role in gene silencing, the …
Conservation and divergence in eukaryotic DNA methylation
Cytosine methylation is a com-mon DNA modification found in most eukaryotic organisms
including plants, animals, and fungi (1, 2). The addition of a methyl group to cytosine …
including plants, animals, and fungi (1, 2). The addition of a methyl group to cytosine …
Genomic patterns and context specific interpretation of DNA methylation
T Baubec, D Schübeler - Current opinion in genetics & development, 2014 - Elsevier
Methylation of CpG dinucleotides is a reversible modification of DNA that is highly prevalent
throughout mammalian genomes. Recent advances generated genomic DNA methylation …
throughout mammalian genomes. Recent advances generated genomic DNA methylation …
Genomics of CpG methylation in developing and developed zebrafish
DM McGaughey, HO Abaan, RM Miller… - G3: Genes …, 2014 - academic.oup.com
DNA methylation is a dynamic process through which specific chromatin modifications can
be stably transmitted from parent to daughter cells. A large body of work has suggested that …
be stably transmitted from parent to daughter cells. A large body of work has suggested that …
Genome-wide and single-base resolution DNA methylomes of the Pacific oyster Crassostrea gigas provide insight into the evolution of invertebrate CpG methylation
Background Studies of DNA methylomes in a wide range of eukaryotes have revealed both
conserved and divergent characteristics of DNA methylation among phylogenetic groups …
conserved and divergent characteristics of DNA methylation among phylogenetic groups …
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