Stochastic NANOG fluctuations allow mouse embryonic stem cells to explore pluripotency

E Abranches, AMV Guedes, M Moravec… - …, 2014 - journals.biologists.com
Heterogeneous expression of the transcription factor NANOG has been linked to the
existence of various functional states in pluripotent stem cells. This heterogeneity seems to …

Transient bursts of Zscan4 expression are accompanied by the rapid derepression of heterochromatin in mouse embryonic stem cells

T Akiyama, L Xin, M Oda, AA Sharov, M Amano… - DNA …, 2015 - academic.oup.com
Mouse embryonic stem cells (mESCs) have a remarkable capacity to maintain normal
genome stability and karyotype in culture. We previously showed that infrequent bursts of …

Fundamental trade-offs between information flow in single cells and cellular populations

R Suderman, JA Bachman, A Smith… - Proceedings of the …, 2017 - National Acad Sciences
Signal transduction networks allow eukaryotic cells to make decisions based on information
about intracellular state and the environment. Biochemical noise significantly diminishes the …

[HTML][HTML] Distinct epigenomic landscapes of pluripotent and lineage-committed human cells

RD Hawkins, GC Hon, LK Lee, QM Ngo, R Lister… - Cell stem cell, 2010 - cell.com
Human embryonic stem cells (hESCs) share an identical genome with lineage-committed
cells, yet possess the remarkable properties of self-renewal and pluripotency. The diverse …

Revealing dynamics of gene expression variability in cell state space

D Grün - Nature methods, 2020 - nature.com
To decipher cell state transitions from single-cell transcriptomes it is crucial to quantify weak
expression of lineage-determining factors, which requires computational methods that are …

Transcription factor binding dynamics during human ES cell differentiation

AM Tsankov, H Gu, V Akopian, MJ Ziller, J Donaghey… - Nature, 2015 - nature.com
Pluripotent stem cells provide a powerful system to dissect the underlying molecular
dynamics that regulate cell fate changes during mammalian development. Here we report …