RNAi, DRD1, and Histone Methylation Actively Target Developmentally Important Non-CG DNA Methylation in Arabidopsis
SWL Chan, IR Henderson, X Zhang, G Shah… - PLoS …, 2006 - journals.plos.org
Cytosine DNA methylation protects eukaryotic genomes by silencing transposons and
harmful DNAs, but also regulates gene expression during normal development. Loss of CG …
harmful DNAs, but also regulates gene expression during normal development. Loss of CG …
Tandem repeats upstream of the Arabidopsis endogene SDC recruit non-CG DNA methylation and initiate siRNA spreading
IR Henderson, SE Jacobsen - Genes & development, 2008 - genesdev.cshlp.org
Plants use siRNAs to target cytosine DNA methylation to both symmetrical CG and
nonsymmetrical (CHG and CHH) sequence contexts. DNA methylation and siRNA clusters …
nonsymmetrical (CHG and CHH) sequence contexts. DNA methylation and siRNA clusters …
Non-CG methylation patterns shape the epigenetic landscape in Arabidopsis
DNA methylation occurs in CG and non-CG sequence contexts. Non-CG methylation is
abundant in plants and is mediated by CHROMOMETHYLASE (CMT) and DOMAINS …
abundant in plants and is mediated by CHROMOMETHYLASE (CMT) and DOMAINS …
DNA methylation-free Arabidopsis reveals crucial roles of DNA methylation in regulating gene expression and development
L He, H Huang, M Bradai, C Zhao, Y You, J Ma… - Nature …, 2022 - nature.com
A contribution of DNA methylation to defense against invading nucleic acids and
maintenance of genome integrity is uncontested; however, our understanding of the extent …
maintenance of genome integrity is uncontested; however, our understanding of the extent …
Moving targets: Mechanisms regulating siRNA production and DNA methylation during plant development
LM Martins, JA Law - Current Opinion in Plant Biology, 2023 - Elsevier
DNA methylation is a conserved modification that must be precisely regulated during
development to facilitate its roles in silencing transposable elements and regulating gene …
development to facilitate its roles in silencing transposable elements and regulating gene …
Decrease in DNA methylation 1 (DDM1) is required for the formation of mCHH islands in maize
JC Long, AA Xia, JH Liu, JL Jing… - Journal of integrative …, 2019 - Wiley Online Library
DNA methylation plays a crucial role in suppressing mobilization of transposable elements
and regulation of gene expression. A number of studies have indicated that DNA …
and regulation of gene expression. A number of studies have indicated that DNA …
DNA Methylation Is Critical for Arabidopsis Embryogenesis and Seed Viability
W Xiao, KD Custard, RC Brown, BE Lemmon… - The Plant …, 2006 - academic.oup.com
Abstract DNA methylation (5-methylcytosine) in mammalian genomes predominantly occurs
at CpG dinucleotides, is maintained by DNA methyltransferase1 (Dnmt1), and is essential for …
at CpG dinucleotides, is maintained by DNA methyltransferase1 (Dnmt1), and is essential for …
Gardening the genome: DNA methylation in Arabidopsis thaliana
SWL Chan, IR Henderson, SE Jacobsen - Nature Reviews Genetics, 2005 - nature.com
DNA methylation has two essential roles in plants and animals—defending the genome
against transposons and regulating gene expression. Recent experiments in Arabidopsis …
against transposons and regulating gene expression. Recent experiments in Arabidopsis …
Identification of genes required for de novo DNA methylation in Arabidopsis
MVC Greenberg, I Ausin, SWL Chan, SJ Cokus… - Epigenetics, 2011 - Taylor & Francis
De novo DNA methylation in Arabidopsis thaliana is catalyzed by the methyltransferase
DRM2, a homolog of the mammalian de novo methyltransferase DNMT3. DRM2 is targeted …
DRM2, a homolog of the mammalian de novo methyltransferase DNMT3. DRM2 is targeted …
Pathway conversion enables a double-lock mechanism to maintain DNA methylation and genome stability
L He, C Zhao, Q Zhang, G Zinta… - Proceedings of the …, 2021 - National Acad Sciences
The CMT2 and RNA-directed DNA methylation (RdDM) pathways have been proposed to
separately maintain CHH methylation in specific regions of the Arabidopsis thaliana …
separately maintain CHH methylation in specific regions of the Arabidopsis thaliana …
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