SRA-domain proteins required for DRM2-mediated de novo DNA methylation

LM Johnson, JA Law, A Khattar, IR Henderson… - PLoS …, 2008 - journals.plos.org
De novo DNA methylation and the maintenance of DNA methylation in asymmetrical
sequence contexts is catalyzed by homologous proteins in plants (DRM2) and animals …

An Arabidopsis jmjC domain protein protects transcribed genes from DNA methylation at CHG sites

A Miura, M Nakamura, S Inagaki, A Kobayashi… - The EMBO …, 2009 - embopress.org
Differential cytosine methylation of genes and transposons is important for maintaining
integrity of plant genomes. In Arabidopsis, transposons are heavily methylated at both CG …

Establishing, maintaining and modifying DNA methylation patterns in plants and animals

JA Law, SE Jacobsen - Nature Reviews Genetics, 2010 - nature.com
Cytosine DNA methylation is a stable epigenetic mark that is crucial for diverse biological
processes, including gene and transposon silencing, imprinting and X chromosome …

Loss of RNA-directed DNA methylation in maize chromomethylase and DDM1-type nucleosome remodeler mutants

FF Fu, RK Dawe, JI Gent - The Plant Cell, 2018 - academic.oup.com
Plants make use of distinct types of DNA methylation characterized by their DNA
methyltransferases and modes of regulation. One type, RNA-directed DNA methylation …

[HTML][HTML] DNA methylation profiling identifies CG methylation clusters in Arabidopsis genes

RK Tran, JG Henikoff, D Zilberman, RF Ditt… - Current Biology, 2005 - cell.com
Cytosine DNA methylation in vertebrates is widespread, but methylation in plants is found
almost exclusively at transposable elements and repetitive DNA [1]. Within regions of …

RNA directed DNA methylation and seed plant genome evolution

R Wambui Mbichi, QF Wang, T Wan - Plant Cell Reports, 2020 - Springer
Abstract RNA Directed DNA Methylation (RdDM) is a pathway that mediates de novo DNA
methylation, an evolutionary conserved chemical modification of cytosine bases, which …

DNA methylation underpins the epigenomic landscape regulating genome transcription in Arabidopsis

L Zhao, Q Zhou, L He, L Deng, R Lozano-Duran, G Li… - Genome biology, 2022 - Springer
Background It is challenging to determine the effect of DNA methylation on the epigenetic
landscape and the function in higher organisms due to the lack of DNA methylation-free …

IDN1 and IDN2 are required for de novo DNA methylation in Arabidopsis thaliana

I Ausin, TC Mockler, J Chory… - Nature structural & …, 2009 - nature.com
DNA methylation is an epigenetic mark affecting genes and transposons. Screening for
mutants that fail to establish DNA methylation yielded two we termed “involved in de …

Redistribution of CHH Methylation and Small Interfering RNAs across the Genome of Tomato ddm1 Mutants

S Corem, A Doron-Faigenboim, O Jouffroy… - The Plant …, 2018 - academic.oup.com
In plants, cytosine methylation, an epigenetic mark critical for transposon silencing, is
maintained over generations by key enzymes that directly methylate DNA and is facilitated …

SHH1, a homeodomain protein required for DNA methylation, as well as RDR2, RDM4, and chromatin remodeling factors, associate with RNA polymerase IV

JA Law, AA Vashisht, JA Wohlschlegel… - PLoS …, 2011 - journals.plos.org
DNA methylation is an evolutionarily conserved epigenetic modification that is critical for
gene silencing and the maintenance of genome integrity. In Arabidopsis thaliana, the de …