[HTML][HTML] DNA methylation: Precise modulation of chromatin structure and dynamics

S Li, Y Peng, AR Panchenko - Current opinion in structural biology, 2022 - Elsevier
DNA methylation plays a vital role in epigenetic regulation in both plants and animals, and
typically occurs at the 5-carbon position of the cytosine pyrimidine ring within the CpG …

DNA methylation affects nuclear organization, histone modifications, and linker histone binding but not chromatin compaction

N Gilbert, I Thomson, S Boyle, J Allan… - The Journal of cell …, 2007 - rupress.org
DNA methylation has been implicated in chromatin condensation and nuclear organization,
especially at sites of constitutive heterochromatin. How this is mediated has not been clear …

[HTML][HTML] Epigenetic control of nuclear architecture

J Espada, M Esteller - Cellular and molecular life sciences, 2007 - Springer
The cell nucleus is a highly structured compartment where nuclear components are thought
to localize in non-random positions. Correct positioning of large chromatin domains may …

DNA methylation and the functional organization of the nuclear compartment

J Espada, M Esteller - Seminars in cell & developmental biology, 2010 - Elsevier
Symmetrical methylation of cytosine residues at CpG dinucleotides of the DNA molecule is a
central epigenetic and heritable hallmark of the genome. This epigenetic modification of …

Chromatin remodeling, histone modifications, and DNA methylation—how does it all fit together?

TM Geiman, KD Robertson - Journal of cellular biochemistry, 2002 - Wiley Online Library
DNA methylation is important in the control of gene transcription and chromatin structure.
The complexities of this process are just beginning to be elucidated in relationship to other …

[PDF][PDF] DNA methylation landscape reflects the spatial organization of chromatin in different cells

L Zhang, WJ Xie, S Liu, L Meng, C Gu, YQ Gao - Biophysical journal, 2017 - cell.com
The relationship between DNA methylation and chromatin structure is still largely unknown.
By analyzing a large set of published sequencing data, we observed a long-range power …

DNA methylation increases nucleosome compaction and rigidity

JS Choy, S Wei, JY Lee, S Tan, S Chu… - Journal of the American …, 2010 - ACS Publications
Cytosine methylation on CpG dinucleotides is an essential epigenetic modification in
eukaryotes. How DNA methylation modulates nucleosome structure and dynamics has been …

[HTML][HTML] Understanding the connection between epigenetic DNA methylation and nucleosome positioning from computer simulations

G Portella, F Battistini, M Orozco - PLoS computational biology, 2013 - journals.plos.org
Cytosine methylation is one of the most important epigenetic marks that regulate the process
of gene expression. Here, we have examined the effect of epigenetic DNA methylation on …

CpG methylation remodels chromatin structure in vitro

C Davey, S Pennings, J Allan - Journal of molecular biology, 1997 - Elsevier
One of the mechanisms proposed to explain how CpG methylation effects gene repression
invokes a DNA methylation-determined chromatin structure. Previous work implied that this …

Effects of DNA methylation on nucleosome stability

CK Collings, PJ Waddell, JN Anderson - Nucleic acids research, 2013 - academic.oup.com
Methylation of DNA at CpG dinucleotides represents one of the most important epigenetic
mechanisms involved in the control of gene expression in vertebrate cells. In this report, we …