5-hydroxymethyl-cytosine enrichment of non-committed cells is not a universal feature of vertebrate development

RD Almeida, M Loose, V Sottile, E Matsa, C Denning… - Epigenetics, 2012 - Taylor & Francis
5-hydroxymethyl-cytosine (5-hmC) is a cytosine modification that is relatively abundant in
mammalian pre-implantation embryos and embryonic stem cells (ESC) derived from …

Distinct dynamics of parental 5-hydroxymethylcytosine during human preimplantation development regulate early lineage gene expression

D Liang, R Yan, X Long, D Ji, B Song, M Wang… - Nature Cell …, 2024 - nature.com
The conversion of DNA 5-methylcytosine (5mC) to 5-hydroxymethylcytosine (5hmC) by TET
enzymes represents a significant epigenetic modification, yet its role in early human …

Semi-quantitative immunohistochemical detection of 5-hydroxymethyl-cytosine reveals conservation of its tissue distribution between amphibians and mammals

RD Almeida, V Sottile, M Loose, PA De Sousa… - Epigenetics, 2012 - Taylor & Francis
5-Hydroxymethyl-cytosine (5-hmC) is a form of modified cytosine, which has recently
attracted a considerable attention due to its potential role in transcriptional regulation …

Functional role of Tet-mediated RNA hydroxymethylcytosine in mouse ES cells and during differentiation

J Lan, N Rajan, M Bizet, A Penning, NK Singh… - Nature …, 2020 - nature.com
Abstract Tet-enzyme-mediated 5-hydroxymethylation of cytosines in DNA plays a crucial role
in mouse embryonic stem cells (ESCs). In RNA also, 5-hydroxymethylcytosine (5hmC) has …

5-hydroxymethylcytosine and gene activity in mouse intestinal differentiation

S Uribe-Lewis, T Carroll, S Menon, A Nicholson… - Scientific reports, 2020 - nature.com
Cytosine hydroxymethylation (5hmC) in mammalian DNA is the product of oxidation of
methylated cytosines (5mC) by Ten-Eleven-Translocation (TET) enzymes. While it has been …

Genome-wide analysis of 5-hydroxymethylcytosine distribution reveals its dual function in transcriptional regulation in mouse embryonic stem cells

H Wu, AC D'Alessio, S Ito, Z Wang, K Cui… - Genes & …, 2011 - genesdev.cshlp.org
Recent studies have demonstrated that the Ten-eleven translocation (Tet) family proteins
can enzymatically convert 5-methylcytosine (5mC) to 5-hydroxymethylcytosine (5hmC) …

[HTML][HTML] Global 5-hydroxymethylcytosine content is significantly reduced in tissue stem/progenitor cell compartments and in human cancers

MC Haffner, A Chaux, AK Meeker, DM Esopi, J Gerber… - Oncotarget, 2011 - ncbi.nlm.nih.gov
DNA methylation at the 5-position of cytosines (5mC) represents an important epigenetic
modification involved in tissue differentiation and is frequently altered in cancer. Recent …

High-resolution enzymatic mapping of genomic 5-hydroxymethylcytosine in mouse embryonic stem cells

Z Sun, J Terragni, JG Borgaro, Y Liu, L Yu, S Guan… - Cell reports, 2013 - cell.com
We describe the use of a unique DNA-modification-dependent restriction endonuclease
AbaSI coupled with sequencing (Aba-seq) to map high-resolution hydroxymethylome of …

5-Hydroxymethylcytosine is associated with enhancers and gene bodies in human embryonic stem cells

H Stroud, S Feng, S Morey Kinney, S Pradhan… - Genome biology, 2011 - Springer
Abstract Background 5-Hydroxymethylcytosine (5hmC) was recently found to be abundantly
present in certain cell types, including embryonic stem cells. There is growing evidence that …

Dynamics of genomic 5‐hydroxymethylcytosine during mouse oocyte growth

A Sakashita, H Kobayashi, T Wakai, Y Sotomaru… - Genes to …, 2014 - Wiley Online Library
Recent studies of the demethylation process in murine zygotes have shown that 5‐
methylcytosine (5mC) is first converted into 5‐hydroxymethylcytosine (5hmC) or further …