[HTML][HTML] Tissue-specific DNA methylation is conserved across human, mouse, and rat, and driven by primary sequence conservation

J Zhou, RL Sears, X Xing, B Zhang, D Li… - BMC genomics, 2017 - Springer
Background Uncovering mechanisms of epigenome evolution is an essential step towards
understanding the evolution of different cellular phenotypes. While studies have confirmed …

Epigenetics: differential DNA methylation in mammalian somatic tissues

H Nagase, S Ghosh - The FEBS journal, 2008 - Wiley Online Library
Epigenetics refers to heritable phenotypic alterations in the absence of DNA sequence
changes, and DNA methylation is one of the extensively studied epigenetic alterations. DNA …

[HTML][HTML] Genome-wide survey reveals dynamic widespread tissue-specific changes in DNA methylation during development

P Liang, F Song, S Ghosh, E Morien, M Qin… - BMC genomics, 2011 - Springer
Background Changes in DNA methylation in the mammalian genome during development
are frequent events and play major roles regulating gene expression and other …

Emerging concept in DNA methylation: role of transcription factors in shaping DNA methylation patterns

C Marchal, B Miotto - Journal of cellular physiology, 2015 - Wiley Online Library
DNA methylation in mammals is a key epigenetic modification essential to normal genome
regulation and development. DNA methylation patterns are established during early …

Temporal uncoupling of the DNA methylome and transcriptional repression during embryogenesis

O Bogdanović, SW Long, SJ van Heeringen… - Genome …, 2011 - genome.cshlp.org
DNA methylation is a tightly regulated epigenetic mark associated with transcriptional
repression. Next-generation sequencing of purified methylated DNA obtained from early …

Dynamic regulation of DNA methylation during mammalian development

S Guibert, T Forné, M Weber - Epigenomics, 2009 - Future Medicine
DNA methylation occurs on cytosines, is catalyzed by DNA methyltransferases (DNMTs),
and is present at high levels in all vertebrates. DNA methylation plays essential roles in …

[HTML][HTML] Genome-wide analysis of DNA methylation dynamics during early human development

H Okae, H Chiba, H Hiura, H Hamada, A Sato… - PLoS …, 2014 - journals.plos.org
DNA methylation is globally reprogrammed during mammalian preimplantation
development, which is critical for normal development. Recent reduced representation …

Mammalian DNA methylome dynamics: mechanisms, functions and new frontiers

A Wei, H Wu - Development, 2022 - journals.biologists.com
ABSTRACT DNA methylation is a highly conserved epigenetic modification that plays
essential roles in mammalian gene regulation, genome stability and development. Despite …

[HTML][HTML] A genome-wide study of DNA methylation patterns and gene expression levels in multiple human and chimpanzee tissues

AA Pai, JT Bell, JC Marioni, JK Pritchard, Y Gilad - PLoS genetics, 2011 - journals.plos.org
The modification of DNA by methylation is an important epigenetic mechanism that affects
the spatial and temporal regulation of gene expression. Methylation patterns have been …

A comparison of gene expression and DNA methylation patterns across tissues and species

LE Blake, J Roux, I Hernando-Herraez… - Genome …, 2020 - genome.cshlp.org
Previously published comparative functional genomic data sets from primates using frozen
tissue samples, including many data sets from our own group, were often collected and …