Chromatin dysregulation and DNA methylation at transcription start sites associated with transcriptional repression in cancers

M Ando, Y Saito, G Xu, NQ Bui… - Nature …, 2019 - nature.com
Although promoter-associated CpG islands have been established as targets of DNA
methylation changes in cancer, previous studies suggest that epigenetic dysregulation …

Transcriptional gene silencing promotes DNA hypermethylation through a sequential change in chromatin modifications in cancer cells

C Stirzaker, JZ Song, B Davidson, SJ Clark - Cancer research, 2004 - AACR
It is well established that DNA hypermethylation of tumor suppressor and tumor-related
genes can occur in cancer cells and that each cancer subtype has specific gene sets that …

[HTML][HTML] Direct ChIP-bisulfite sequencing reveals a role of H3K27me3 mediating aberrant hypermethylation of promoter CpG islands in cancer cells

F Gao, G Ji, Z Gao, X Han, M Ye, Z Yuan, H Luo… - Genomics, 2014 - Elsevier
The model describing that aberrant CpG island (CGI) methylation leads to repression of
tumour suppressor genes in cancers has been influential, but it remains unclear how such …

Defining a chromatin pattern that characterizes DNA-hypermethylated genes in colon cancer cells

KM McGarvey, L Van Neste, L Cope, JE Ohm… - Cancer research, 2008 - AACR
Epigenetic gene regulation is a key determinant of heritable gene expression patterns and is
critical for normal cellular function. Dysregulation of epigenetic transcriptional control is a …

DNA hypermethylation encroachment at CpG island borders in cancer is predisposed by H3K4 monomethylation patterns

K Skvortsova, E Masle-Farquhar, PL Luu, JZ Song… - Cancer cell, 2019 - cell.com
Promoter CpG islands are typically unmethylated in normal cells, but in cancer a proportion
are subject to hypermethylation. Using methylome sequencing we identified CpG islands …

Cancer epigenomics: DNA methylomes and histone-modification maps

M Esteller - Nature reviews genetics, 2007 - nature.com
An altered pattern of epigenetic modifications is central to many common human diseases,
including cancer. Many studies have explored the mosaic patterns of DNA methylation and …

Genome-wide distribution of DNA methylation and DNA demethylation and related chromatin regulators in cancer

Y Jiang, S Liu, X Chen, Y Cao, Y Tao - Biochimica et Biophysica Acta (BBA) …, 2013 - Elsevier
DNA methylation plays an important role in the regulation of gene expression, as it is the first
epigenetic modification to take place on a given DNA strand. Several factors may directly or …

CpG island methylation in a mouse model of lymphoma is driven by the genetic configuration of tumor cells

R Opavsky, SH Wang, P Trikha, A Raval, Y Huang… - PLoS …, 2007 - journals.plos.org
Hypermethylation of CpG islands is a common epigenetic alteration associated with cancer.
Global patterns of hypermethylation are tumor-type specific and nonrandom. The biological …

Predicting aberrant CpG island methylation

FA Feltus, EK Lee, JF Costello… - Proceedings of the …, 2003 - National Acad Sciences
Epigenetic silencing associated with aberrant methylation of promoter region CpG islands is
one mechanism leading to loss of tumor suppressor function in human cancer. Profiling of …

Evidence for an instructive mechanism of de novo methylation in cancer cells

I Keshet, Y Schlesinger, S Farkash, E Rand, M Hecht… - Nature …, 2006 - nature.com
DNA methylation has a role in the regulation of gene expression during normal mammalian
development but can also mediate epigenetic silencing of CpG island genes in cancer and …