A genome-wide DNA methylation study in colorectal carcinoma

MG Kibriya, M Raza, F Jasmine, S Roy… - BMC medical …, 2011 - Springer
Background We performed a genome-wide scan of 27,578 CpG loci covering 14,475 genes
to identify differentially methylated loci (DML) in colorectal carcinoma (CRC). Methods We …

Genome-wide analysis of promoter methylation associated with gene expression profile in pancreatic adenocarcinoma

A Vincent, N Omura, SM Hong, A Jaffe, J Eshleman… - Clinical cancer …, 2011 - AACR
Purpose: The goal of this study was to comprehensively identify CpG island methylation
alterations between pancreatic cancers and normal pancreata and their associated gene …

A suite of DNA methylation markers that can detect most common human cancers

L Vrba, BW Futscher - Epigenetics, 2018 - Taylor & Francis
Cancer-specific DNA methylation from the tumor derived fraction of cell free DNA found in
blood samples could be used for minimally invasive detection and monitoring of cancer. The …

[HTML][HTML] Genome-wide profiling of DNA methylation in human cancer cells

K Ogoshi, S Hashimoto, Y Nakatani, W Qu, K Oshima… - Genomics, 2011 - Elsevier
Global changes in DNA methylation correlate with altered gene expression and genomic
instability in cancer. We have developed a methylation-specific digital sequencing (MSDS) …

Comparing the DNA hypermethylome with gene mutations in human colorectal cancer

KE Schuebel, W Chen, L Cope, SC Glöckner… - PLoS …, 2007 - journals.plos.org
We have developed a transcriptome-wide approach to identify genes affected by promoter
CpG island DNA hypermethylation and transcriptional silencing in colorectal cancer. By …

Methylation of tumor associated genes in tissue and plasma samples from liver disease patients

H Chang, B Yi, L Li, HY Zhang, F Sun, SQ Dong… - … and molecular pathology, 2008 - Elsevier
To investigate whether aberrant hypermethylation in plasma DNA could be used as
diagnosis makers for hepatocellular carcinoma (HCC), we performed methylation-specific …

Tumour class prediction and discovery by microarray-based DNA methylation analysis

P Adorján, J Distler, E Lipscher, F Model… - Nucleic acids …, 2002 - academic.oup.com
Aberrant DNA methylation of CpG sites is among the earliest and most frequent alterations
in cancer. Several studies suggest that aberrant methylation occurs in a tumour type-specific …

DNA methyltransferase expression and DNA hypermethylation in human hepatocellular carcinoma

HJ Park, E Yu, YH Shim - Cancer letters, 2006 - Elsevier
Aberrant DNA methylation and increased expression of DNA methyltransferases (DNMTs)
are features of tumor cells. To investigate roles for DNMTs during hepatocarcinogenesis, we …

Plasma DNA methylation marker and hepatocellular carcinoma risk prediction model for the general population

HC Wu, HI Yang, Q Wang, CJ Chen… - …, 2017 - academic.oup.com
Metastases in the later stages of hepatocellular carcinoma (HCC) cause the majority of
deaths associated with the disease, making early detection crucial to patient survival. Risk …

Methylation profile of single hepatocytes derived from hepatitis B virus-related hepatocellular carcinoma

R Tao, J Li, J Xin, J Wu, J Guo, L Zhang, L Jiang… - PloS one, 2011 - journals.plos.org
Background With the development of high-throughput screening, a variety of genetic
alterations has been found in hepatocellular carcinoma (HCC). Although previous studies …