Methylation meets genomics

AP Feinberg - Nature genetics, 2001 - nature.com
I respectfully propose this neologism because it serves to formally unite the study of DNA
methylation with the power of modern genomics. At this writing, the word does not appear in …

Epigenetic inheritance is unfaithful at intermediately methylated CpG sites

AD Hay, NJ Kessler, D Gebert, N Takahashi… - Nature …, 2023 - nature.com
DNA methylation at the CpG dinucleotide is considered a stable epigenetic mark due to its
presumed long-term inheritance through clonal expansion. Here, we perform high …

Distribution, silencing potential and evolutionary impact of promoter DNA methylation in the human genome

M Weber, I Hellmann, MB Stadler, L Ramos, S Pääbo… - Nature …, 2007 - nature.com
To gain insight into the function of DNA methylation at cis-regulatory regions and its impact
on gene expression, we measured methylation, RNA polymerase occupancy and histone …

CpG methylation is maintained in human cancer cells lacking DNMT1

I Rhee, KW Jair, RWC Yen, C Lengauer, JG Herman… - Nature, 2000 - nature.com
Hypermethylation is associated with the silencing of tumour susceptibility genes in several
forms of cancer,; however, the mechanisms responsible for this aberrant methylation are …

Putting the DNA back into DNA methylation

A Bird - Nature genetics, 2011 - nature.com
Putting the DNA back into DNA methylation | Nature Genetics Skip to main content Thank you
for visiting nature.com. You are using a browser version with limited support for CSS. To obtain …

DNA methylation represses transcription in vivo

Z Siegfried, S Eden, M Mendelsohn, X Feng… - Nature …, 1999 - nature.com
DNA in somatic tissue is characterized by a bimodal pattern of methylation, which is
established in the animal through a series of developmental events 1. In the mouse blastula …

Chromosome-wide and promoter-specific analyses identify sites of differential DNA methylation in normal and transformed human cells

M Weber, JJ Davies, D Wittig, EJ Oakeley, M Haase… - Nature …, 2005 - nature.com
Cytosine methylation is required for mammalian development and is often perturbed in
human cancer. To determine how this epigenetic modification is distributed in the genomes …

DNMT1 and DNMT3b cooperate to silence genes in human cancer cells

I Rhee, KE Bachman, BH Park, KW Jair, RWC Yen… - Nature, 2002 - nature.com
Inactivation of tumour suppressor genes is central to the development of all common forms
of human cancer 1. This inactivation often results from epigenetic silencing associated with …

DNA methylation and DNA methyltransferases

JR Edwards, O Yarychkivska, M Boulard… - Epigenetics & …, 2017 - Springer
The prevailing views as to the form, function, and regulation of genomic methylation patterns
have their origin many years in the past, at a time when the structure of the mammalian …

[HTML][HTML] Genome-wide methylation analysis of human colon cancer reveals similar hypo-and hypermethylation at conserved tissue-specific CpG island shores

RA Irizarry, C Ladd-Acosta, B Wen, Z Wu… - Nature …, 2009 - ncbi.nlm.nih.gov
Alterations in DNA methylation (DNAm) in cancer have been known for 25 years, including
hypomethylation of oncogenes and hypermethylation of tumor suppressor genes 1 …