[HTML][HTML] Elucidating disease-associated mechanisms triggered by pollutants via the epigenetic landscape using large-scale ChIP-Seq data

Z Zou, Y Yoshimura, Y Yamanishi, S Oki - Epigenetics & Chromatin, 2023 - Springer
Background Despite well-documented effects on human health, the action modes of
environmental pollutants are incompletely understood. Although transcriptome-based …

[HTML][HTML] Predicting environmental chemical factors associated with disease-related gene expression data

CJ Patel, AJ Butte - BMC medical genomics, 2010 - Springer
Background Many common diseases arise from an interaction between environmental and
genetic factors. Our knowledge regarding environment and gene interactions is growing, but …

[PDF][PDF] Transforming environmental health datasets from the Comparative Toxicogenomics Database into chord diagrams to visualize molecular mechanisms

B Wyatt, AP Davis, TC Wiegers, J Wiegers… - Frontiers in …, 2024 - frontiersin.org
Chemicals are important environmental factors that can affect human health, yet the
molecular mechanisms connecting an exposure to an adverse outcome often remain …

Testing cell-type-specific mediation effects in genome-wide epigenetic studies

X Luo, J Schwartz, A Baccarelli… - Briefings in …, 2021 - academic.oup.com
Epigenome-wide mediation analysis aims to identify DNA methylation CpG sites that
mediate the causal effects of genetic/environmental exposures on health outcomes …

Adopting Mechanistic Molecular Biology Approaches in Exposome Research for Causal Understanding

AL Foreman, B Warth, EVS Hessel… - Environmental …, 2024 - ACS Publications
Through investigating the combined impact of the environmental exposures experienced by
an individual throughout their lifetime, exposome research provides opportunities to …

Leveraging the comparative toxicogenomics database to fill in knowledge gaps for environmental health: a test case for air pollution-induced cardiovascular disease

AP Davis, TC Wiegers, CJ Grondin… - Toxicological …, 2020 - academic.oup.com
Environmental health studies relate how exposures (eg, chemicals) affect human health and
disease; however, in most cases, the molecular and biological mechanisms connecting an …

[HTML][HTML] Gene-environment interactions within a precision environmental health framework

AA Motsinger-Reif, DM Reif, FS Akhtari, JS House… - Cell Genomics, 2024 - cell.com
Understanding the complex interplay of genetic and environmental factors in disease
etiology and the role of gene-environment interactions (GEIs) across human development …

[HTML][HTML] Short-term airborne particulate matter exposure alters the epigenetic landscape of human genes associated with the mitogen-activated protein kinase network …

JJ Carmona, T Sofer, J Hutchinson, L Cantone… - Environmental …, 2014 - Springer
Background Exposure to air particulate matter is known to elevate blood biomarkers of
inflammation and to increase cardiopulmonary morbidity and mortality. Major components of …

[HTML][HTML] Dissecting heritability, environmental risk, and air pollution causal effects using> 50 million individuals in MarketScan

D McGuire, H Markus, L Yang, J Xu… - Nature …, 2024 - nature.com
Large national-level electronic health record (EHR) datasets offer new opportunities for
disentangling the role of genes and environment through deep phenotype information and …

Precision environmental health monitoring by longitudinal exposome and multi-omics profiling

P Gao, X Shen, X Zhang, C Jiang, S Zhang… - Genome …, 2022 - genome.cshlp.org
Conventional environmental health studies have primarily focused on limited environmental
stressors at the population level, which lacks the power to dissect the complexity and …