[HTML][HTML] Exploring cancer genomic data from the cancer genome atlas project

JS Lee - BMB reports, 2016 - ncbi.nlm.nih.gov
Abstract The Cancer Genome Atlas (TCGA) has compiled genomic, epigenomic, and
proteomic data from more than 10,000 samples derived from 33 types of cancer, aiming to …

[HTML][HTML] The cancer genome atlas: creating lasting value beyond its data

C Hutter, JC Zenklusen - Cell, 2018 - cell.com
The Cancer Genome Atlas: Creating Lasting Value beyond Its Data: Cell Skip to Main Content
Advertisement Cell This journal offers authors two options (open access or subscription) to …

Review The Cancer Genome Atlas (TCGA): an immeasurable source of knowledge

K Tomczak, P Czerwińska… - Contemporary Oncology …, 2015 - termedia.pl
The Cancer Genome Atlas (TCGA) is a public funded project that aims to catalogue and
discover major cancer-causing genomic alterations to create a comprehensive “atlas” of …

[HTML][HTML] Perspective on oncogenic processes at the end of the beginning of cancer genomics

L Ding, MH Bailey, E Porta-Pardo, V Thorsson… - Cell, 2018 - cell.com
Summary The Cancer Genome Atlas (TCGA) has catalyzed systematic characterization of
diverse genomic alterations underlying human cancers. At this historic junction marking the …

The Cancer Genome Atlas Clinical Explorer: a web and mobile interface for identifying clinical–genomic driver associations

HJ Lee, J Palm, SM Grimes, HP Ji - Genome medicine, 2015 - Springer
Abstract Background The Cancer Genome Atlas (TCGA) project has generated genomic
data sets covering over 20 malignancies. These data provide valuable insights into the …

[HTML][HTML] The cancer genome atlas pan-cancer analysis project

JN Weinstein, EA Collisson, GB Mills, KR Shaw… - Nature …, 2013 - nature.com
Abstract The Cancer Genome Atlas (TCGA) Research Network has profiled and analyzed
large numbers of human tumors to discover molecular aberrations at the DNA, RNA, protein …

Data mining The Cancer Genome Atlas in the era of precision cancer medicine

PF Cheng, R Dummer, MP Levesque - Swiss medical weekly, 2015 - smw.ch
Summary The Cancer Genome Atlas (TCGA) has given researchers and clinicians
unprecedented access to many different cancers through multiple platforms that include …

Identification of druggable cancer driver genes amplified across TCGA datasets

Y Chen, J McGee, X Chen, TN Doman, X Gong… - PloS one, 2014 - journals.plos.org
The Cancer Genome Atlas (TCGA) projects have advanced our understanding of the driver
mutations, genetic backgrounds, and key pathways activated across cancer types. Analysis …

A pathology atlas of the human cancer transcriptome

M Uhlen, C Zhang, S Lee, E Sjöstedt, L Fagerberg… - Science, 2017 - science.org
INTRODUCTION Cancer is a leading cause of death worldwide, and there is great need to
define the molecular mechanisms driving the development and progression of individual …

TCGA expedition: a data acquisition and management system for TCGA data

UR Chandran, OP Medvedeva, MM Barmada… - PloS one, 2016 - journals.plos.org
Background The Cancer Genome Atlas Project (TCGA) is a National Cancer Institute effort to
profile at least 500 cases of 20 different tumor types using genomic platforms and to make …