Variations in DNA methylation patterns during the cell cycle of HeLa cells

SE Brown, MF Fraga, ICG Weaver, M Berdasco… - Epigenetics, 2007 - Taylor & Francis
DNA methylation has been viewed as a stable component of the epigenome, which is
established during development and fixed thereafter. We show here using nearest neighbor …

Chromosome-wide and promoter-specific analyses identify sites of differential DNA methylation in normal and transformed human cells

M Weber, JJ Davies, D Wittig, EJ Oakeley, M Haase… - Nature …, 2005 - nature.com
Cytosine methylation is required for mammalian development and is often perturbed in
human cancer. To determine how this epigenetic modification is distributed in the genomes …

Extensive sequence-influenced DNA methylation polymorphism in the human genome

A Hellman, A Chess - Epigenetics & chromatin, 2010 - Springer
Background Epigenetic polymorphisms are a potential source of human diversity, but their
frequency and relationship to genetic polymorphisms are unclear. DNA methylation, an …

Different measures of “genome-wide” DNA methylation exhibit unique properties in placental and somatic tissues

EM Price, AM Cotton, MS Peñaherrera… - Epigenetics, 2012 - Taylor & Francis
DNA methylation of CpGs located in two types of repetitive elements—LINE1 (L1) and Alu—
is used to assess “global” changes in DNA methylation in studies of human disease and …

Epigenetics: differential DNA methylation in mammalian somatic tissues

H Nagase, S Ghosh - The FEBS journal, 2008 - Wiley Online Library
Epigenetics refers to heritable phenotypic alterations in the absence of DNA sequence
changes, and DNA methylation is one of the extensively studied epigenetic alterations. DNA …

DNA methylation profiling of human chromosomes 6, 20 and 22

F Eckhardt, J Lewin, R Cortese, VK Rakyan, J Attwood… - Nature …, 2006 - nature.com
DNA methylation is the most stable type of epigenetic modification modulating the
transcriptional plasticity of mammalian genomes. Using bisulfite DNA sequencing, we report …

The relationship between DNA methylation, genetic and expression inter-individual variation in untransformed human fibroblasts

JR Wagner, S Busche, B Ge, T Kwan, T Pastinen… - Genome biology, 2014 - Springer
Background DNA methylation plays an essential role in the regulation of gene expression.
While its presence near the transcription start site of a gene has been associated with …

A high-throughput DNA methylation analysis of a single cell

M Kantlehner, R Kirchner, P Hartmann… - Nucleic acids …, 2011 - academic.oup.com
In recent years, the field of epigenetics has grown dramatically and has become one of the
most dynamic and fast-growing branches of molecular biology. The amount of diseases …

Analysis of epigenetic modifications of DNA in human cells

LS Kristensen, MB Treppendahl… - Current protocols in …, 2013 - Wiley Online Library
Epigenetics, the study of somatically heritable changes in gene expression not related to
changes in the DNA sequence, is a rapidly expanding research field that plays important …

Improved quantification of DNA methylation using methylation-sensitive restriction enzymes and real-time PCR

K Hashimoto, S Kokubun, E Itoi, HI Roach - Epigenetics, 2007 - Taylor & Francis
Heterogeneity of cells with respect to the DNA methylation status at a specific CpG site is a
problem when assessing methylation status. We have developed a simple two-step method …