Methylation matters

JF Costello, C Plass - Journal of medical genetics, 2001 - jmg.bmj.com
DNA methylation is not just for basic scientists any more. There is a growing awareness in
the medical field that having the correct pattern of genomic methylation is essential for …

Measuring cell-type specific differential methylation in human brain tissue

CM Montaño, RA Irizarry, WE Kaufmann, K Talbot… - Genome biology, 2013 - Springer
The behavior of epigenetic mechanisms in the brain is obscured by tissue heterogeneity and
disease-related histological changes. Not accounting for these confounders leads to biased …

Substantial DNA methylation differences between two major neuronal subtypes in human brain

A Kozlenkov, M Wang, P Roussos… - Nucleic acids …, 2016 - academic.oup.com
The brain is built from a large number of cell types which have been historically classified
using location, morphology and molecular markers. Recent research suggests an important …

Abundant quantitative trait loci exist for DNA methylation and gene expression in human brain

JR Gibbs, MP Van Der Brug, DG Hernandez… - PLoS …, 2010 - journals.plos.org
A fundamental challenge in the post-genome era is to understand and annotate the
consequences of genetic variation, particularly within the context of human tissues. We …

Extensive sequence-influenced DNA methylation polymorphism in the human genome

A Hellman, A Chess - Epigenetics & chromatin, 2010 - Springer
Background Epigenetic polymorphisms are a potential source of human diversity, but their
frequency and relationship to genetic polymorphisms are unclear. DNA methylation, an …

Methods in DNA methylation profiling

T Zuo, B Tycko, TM Liu, HJL Lin, THM Huang - Epigenomics, 2009 - Taylor & Francis
Metastable and somatically heritable patterns of DNA methylation provide an important level
of genomic regulation. In this article, we review methods for analyzing these genome-wide …

Non-CG methylation in the human genome

Y He, JR Ecker - Annual review of genomics and human …, 2015 - annualreviews.org
DNA methylation is a chemical modification that occurs predominantly on CG dinucleotides
in mammalian genomes. However, recent studies have revealed that non-CG methylation …

Genetics meets DNA methylation in rare diseases

G Velasco, C Francastel - Clinical genetics, 2019 - Wiley Online Library
Alterations in epigenetic landscapes are hallmarks of many complex human diseases, yet, it
is often challenging to assess the underlying mechanisms and causal link with clinical …

Concordant and discordant DNA methylation signatures of aging in human blood and brain

P Farré, MJ Jones, MJ Meaney, E Emberly… - Epigenetics & …, 2015 - Springer
Background DNA methylation is an epigenetic mark that balances plasticity with stability.
While DNA methylation exhibits tissue specificity, it can also vary with age and potentially …

[HTML][HTML] EBV transformation and cell culturing destabilizes DNA methylation in human lymphoblastoid cell lines

D Grafodatskaya, S Choufani, JC Ferreira, DT Butcher… - Genomics, 2010 - Elsevier
Recent research suggests that epigenetic alterations involving DNA methylation can be
causative for neurodevelopmental, growth and metabolic disorders. Although …