The dynamics of DNA methylation fidelity during mouse embryonic stem cell self-renewal and differentiation

L Zhao, M Sun, Z Li, X Bai, M Yu, M Wang… - Genome …, 2014 - genome.cshlp.org
The faithful transmission of DNA methylation patterns through cell divisions is essential for
the daughter cells to retain a proper cell identity. To achieve a comprehensive assessment …

Computational analysis of genome-wide DNA methylation during the differentiation of human embryonic stem cells along the endodermal lineage

L Chavez, J Jozefczuk, C Grimm, J Dietrich… - Genome …, 2010 - genome.cshlp.org
The generation of genome-wide data derived from methylated DNA immunoprecipitation
followed by sequencing (MeDIP-seq) has become a major tool for epigenetic studies in …

Single-cell methylome landscapes of mouse embryonic stem cells and early embryos analyzed using reduced representation bisulfite sequencing

H Guo, P Zhu, X Wu, X Li, L Wen, F Tang - Genome research, 2013 - genome.cshlp.org
DNA methylation is crucial for a wide variety of biological processes, yet no technique
suitable for the methylome analysis of DNA methylation at single-cell resolution is available …

Dynamic changes in the human methylome during differentiation

L Laurent, E Wong, G Li, T Huynh, A Tsirigos… - Genome …, 2010 - genome.cshlp.org
DNA methylation is a critical epigenetic regulator in mammalian development. Here, we
present a whole-genome comparative view of DNA methylation using bisulfite sequencing of …

Dynamic instability of genomic methylation patterns in pluripotent stem cells

SKT Ooi, D Wolf, O Hartung, S Agarwal, GQ Daley… - Epigenetics & …, 2010 - Springer
Background Genomic methylation patterns are established during gametogenesis, and
perpetuated in somatic cells by faithful maintenance methylation. There have been previous …

New insights into mechanisms that regulate DNA methylation patterning

G Ficz - Journal of Experimental Biology, 2015 - journals.biologists.com
From a fertilised egg to a mature organism, cells divide and accumulate epigenetic
information, which is faithfully passed on to daughter cells. DNA methylation consolidates …

Strand-specific single-cell methylomics reveals distinct modes of DNA demethylation dynamics during early mammalian development

M Sen, D Mooijman, A Chialastri, JC Boisset… - Nature …, 2021 - nature.com
DNA methylation (5mC) is central to cellular identity. The global erasure of 5mC from the
parental genomes during preimplantation mammalian development is critical to reset the …

Dynamic regulation of DNA methylation during mammalian development

S Guibert, T Forné, M Weber - Epigenomics, 2009 - Taylor & Francis
DNA methylation occurs on cytosines, is catalyzed by DNA methyltransferases (DNMTs),
and is present at high levels in all vertebrates. DNA methylation plays essential roles in …

Impairment of DNA methylation maintenance is the main cause of global demethylation in naive embryonic stem cells

F Von Meyenn, M Iurlaro, E Habibi, NQ Liu… - Molecular cell, 2016 - cell.com
Global demethylation is part of a conserved program of epigenetic reprogramming to naive
pluripotency. The transition from primed hypermethylated embryonic stem cells (ESCs) to …

Distinct DNA methylation patterns characterize differentiated human embryonic stem cells and developing human fetal liver

AL Brunner, DS Johnson, SW Kim, A Valouev… - Genome …, 2009 - genome.cshlp.org
To investigate the role of DNA methylation during human development, we developed
Methyl-seq, a method that assays DNA methylation at more than 90,000 regions throughout …