Tissue-specific DNA methylation is conserved across human, mouse, and rat, and driven by primary sequence conservation

J Zhou, RL Sears, X Xing, B Zhang, D Li… - BMC genomics, 2017 - Springer
Background Uncovering mechanisms of epigenome evolution is an essential step towards
understanding the evolution of different cellular phenotypes. While studies have confirmed …

DNA methylation: a timeline of methods and applications

A Harrison, A Parle-McDermott - Frontiers in genetics, 2011 - frontiersin.org
DNA methylation is a biochemical process where a DNA base, usually cytosine, is
enzymatically methylated at the 5-carbon position. An epigenetic modification associated …

Replication timing-related and gene body-specific methylation of active human genes

D Aran, G Toperoff, M Rosenberg… - Human molecular …, 2011 - academic.oup.com
Understanding how the epigenetic blueprint of the genome shapes human phenotypes
requires systematic evaluation of the complex interplay between gene activity and the …

Sex-specific DNA methylation: impact on human health and development

P Govender, M Ghai, M Okpeku - Molecular Genetics and Genomics, 2022 - Springer
Human evolution has shaped gender differences between males and females. Over the
years, scientific studies have proposed that epigenetic modifications significantly influence …

[HTML][HTML] Sex-specific variations in global DNA methylation levels with age: a population-based exploratory study from North India

A Kaushik, V Chaudhary, I Longkumer… - Frontiers in …, 2023 - frontiersin.org
Purpose: Aging is one of the most important risk factors for a number of human diseases.
Epigenetic alterations, including changes in DNA methylation patterns, have been reported …

Systematic identification of genetic influences on methylation across the human life course

TR Gaunt, HA Shihab, G Hemani, JL Min, G Woodward… - Genome biology, 2016 - Springer
Background The influence of genetic variation on complex diseases is potentially mediated
through a range of highly dynamic epigenetic processes exhibiting temporal variation during …

Guidance for DNA methylation studies: statistical insights from the Illumina EPIC array

G Mansell, TJ Gorrie-Stone, Y Bao, M Kumari… - BMC genomics, 2019 - Springer
Background There has been a steady increase in the number of studies aiming to identify
DNA methylation differences associated with complex phenotypes. Many of the challenges …

Considerations for design and analysis of DNA methylation studies

KB Michels, AM Binder - DNA Methylation Protocols, 2018 - Springer
The number of epigenetic studies is exponentially increasing. There is anticipation that DNA
methylation may close gaps in our understanding of disease etiology, and how certain risk …

Genome‐wide DNA methylation profiling

M Bibikova, JB Fan - Wiley Interdisciplinary Reviews: Systems …, 2010 - Wiley Online Library
DNA methylation plays a critical role in the regulation of gene expression. The ability to
access the methylation status for a large number of genes or the entire genome should …

Genome-wide survey reveals dynamic widespread tissue-specific changes in DNA methylation during development

P Liang, F Song, S Ghosh, E Morien, M Qin… - BMC genomics, 2011 - Springer
Background Changes in DNA methylation in the mammalian genome during development
are frequent events and play major roles regulating gene expression and other …