Roles of cell division and gene transcription in the methylation of CpG islands

CM Bender, ML Gonzalgo, FA Gonzales… - … and cellular biology, 1999 - Am Soc Microbiol
De novo methylation of CpG islands within the promoters of eukaryotic genes is often
associated with their transcriptional repression, yet the methylation of CpG islands located …

Footprinting of mammalian promoters: use of a CpG DNA methyltransferase revealing nucleosome positions at a single molecule level

M Fatemi, MM Pao, S Jeong, EN Gal-Yam… - Nucleic acids …, 2005 - academic.oup.com
Promoters are molecular 'modules', which are controlled as individual entities yet are often
analyzed by nuclease digestion methodologies which, a priori, destroy this modularity …

Dynamic CpG island methylation landscape in oocytes and preimplantation embryos

SA Smallwood, S Tomizawa, F Krueger, N Ruf… - Nature …, 2011 - nature.com
Elucidating how and to what extent CpG islands (CGIs) are methylated in germ cells is
essential to understand genomic imprinting and epigenetic reprogramming,,. Here we …

Contrasting chromatin organization of CpG islands and exons in the human genome

JK Choi - Genome biology, 2010 - Springer
Background CpG islands and nucleosome-free regions are both found in promoters.
However, their association has never been studied. On the other hand, DNA methylation is …

A genome-wide analysis of CpG dinucleotides in the human genome distinguishes two distinct classes of promoters

S Saxonov, P Berg, DL Brutlag - Proceedings of the …, 2006 - National Acad Sciences
A striking feature of the human genome is the dearth of CpG dinucleotides (CpGs)
interrupted occasionally by CpG islands (CGIs), regions with relatively high content of the …

DNA methylation profiles of CpG islands for cellular differentiation and development in mammals

K Shiota - Cytogenetic and genome research, 2004 - karger.com
DNA methylation has been implicated in mammalian development. Transcription units
contain CpG islands, but expression of CpG island associated genes in normal tissues was …

Functional analysis of promoter CPG-methylation using a CpG-free luciferase reporter vector

M Klug, M Rehli - Epigenetics, 2006 - Taylor & Francis
Methylation of CpG-dinucleotides within proximal promoters is often associated with
transcriptional silencing. Methylation-dependent repression is well established for …

The presence of RNA polymerase II, active or stalled, predicts epigenetic fate of promoter CpG islands

H Takeshima, S Yamashita, T Shimazu, T Niwa… - Genome …, 2009 - genome.cshlp.org
Instructive mechanisms are present for induction of DNA methylation, as shown by
methylation of specific CpG islands (CGIs) by specific inducers and in specific cancers …

BANP opens chromatin and activates CpG-island-regulated genes

RS Grand, L Burger, C Gräwe, AK Michael, L Isbel… - Nature, 2021 - nature.com
The majority of gene transcripts generated by RNA polymerase II in mammalian genomes
initiate at CpG island (CGI) promoters,, yet our understanding of their regulation remains …

CpG islands and genes

SH Cross, AP Bird - Current opinion in genetics & development, 1995 - Elsevier
Of the estimated 45 000 CpG islands in the human genome, the overwhelming majority are
found at the 5′ ends of genes and their identification and cloning are proving very useful for …