[HTML][HTML] DNA motifs associated with aberrant CpG island methylation
Epigenetic silencing involving the aberrant methylation of promoter region CpG islands is
widely recognized as a tumor suppressor silencing mechanism in cancer. However, the …
widely recognized as a tumor suppressor silencing mechanism in cancer. However, the …
Predicting aberrant CpG island methylation
Epigenetic silencing associated with aberrant methylation of promoter region CpG islands is
one mechanism leading to loss of tumor suppressor function in human cancer. Profiling of …
one mechanism leading to loss of tumor suppressor function in human cancer. Profiling of …
Methylation profiling of CpG islands in human breast cancer cells
THM Huang, MR Perry, DE Laux - Human molecular genetics, 1999 - academic.oup.com
CpG island hypermethylation is known to be associated with gene silencing in cancer. This
epigenetic event is generally accepted as a stochastic process in tumor cells resulting from …
epigenetic event is generally accepted as a stochastic process in tumor cells resulting from …
A multifactorial signature of DNA sequence and polycomb binding predicts aberrant CpG island methylation
Aberrant CpG island methylation is associated with transcriptional silencing of regulatory
genes in human cancer. Although most CpG islands remain unmethylated, a subset accrues …
genes in human cancer. Although most CpG islands remain unmethylated, a subset accrues …
Evaluation of single CpG sites as proxies of CpG island methylation states at the genome scale
V Barrera, MA Peinado - Nucleic acids research, 2012 - academic.oup.com
Methylation of a CpG island is a faithful marker of silencing of its associated gene. Different
approaches report the methylation status of a CpG island based on the determination of one …
approaches report the methylation status of a CpG island based on the determination of one …
Altered methylation patterns in cancer cell genomes: cause or consequence?
CpG islands are associated with at least half of all cellular genes and are normally
methylation-free. Dense methylation of cytosine residues within islands causes strong and …
methylation-free. Dense methylation of cytosine residues within islands causes strong and …
Aberrant CpG-island methylation has non-random and tumour-type–specific patterns
JF Costello, MC Frühwald, DJ Smiraglia, LJ Rush… - Nature …, 2000 - nature.com
CpG islands frequently contain gene promoters or exons 1 and are usually unmethylated in
normal cells 1, 2, 3. Methylation of CpG islands is associated with delayed replication …
normal cells 1, 2, 3. Methylation of CpG islands is associated with delayed replication …
Genome-wide profiling of DNA methylation reveals a class of normally methylated CpG island promoters
The role of CpG island methylation in normal development and cell differentiation is of keen
interest, but remains poorly understood. We performed comprehensive DNA methylation …
interest, but remains poorly understood. We performed comprehensive DNA methylation …
Genome-wide CpG island methylation and intergenic demethylation propensities vary among different tumor sites
ST Lee, JL Wiemels - Nucleic acids research, 2016 - academic.oup.com
The epigenetic landscape of cancer includes both focal hypermethylation and broader
hypomethylation in a genome-wide manner. By means of a comprehensive genomic …
hypomethylation in a genome-wide manner. By means of a comprehensive genomic …
An AscI boundary library for the studies of genetic and epigenetic alterations in CpG islands
Z Dai, D Weichenhan, YZ Wu, JL Hall, LJ Rush… - Genome …, 2002 - genome.cshlp.org
Knudson's two-hit hypothesis postulates that genetic alterations in both alleles are required
for the inactivation of tumor-suppressor genes. Genetic alterations include small or large …
for the inactivation of tumor-suppressor genes. Genetic alterations include small or large …