[HTML][HTML] Base-resolution DNA methylation landscape of zebrafish brain and liver
A Chatterjee, PA Stockwell, JA Horsfield, IM Morison… - Genomics Data, 2014 - Elsevier
Zebrafish (Danio rerio) is a vertebrate model organism that is widely used for studying a
plethora of biological questions, including developmental processes, effects of external cues …
plethora of biological questions, including developmental processes, effects of external cues …
Comparative epigenomic profiling of the DNA methylome in mouse and zebrafish uncovers high interspecies divergence
The DNA methylation landscape is dynamically patterned during development and distinct
methylation patterns distinguish healthy from diseased cells. However, whether tissue …
methylation patterns distinguish healthy from diseased cells. However, whether tissue …
Differential DNA methylation analysis without a reference genome
Genome-wide DNA methylation mapping uncovers epigenetic changes associated with
animal development, environmental adaptation, and species evolution. To address the lack …
animal development, environmental adaptation, and species evolution. To address the lack …
Mapping the zebrafish brain methylome using reduced representation bisulfite sequencing
A Chatterjee, Y Ozaki, PA Stockwell, JA Horsfield… - Epigenetics, 2013 - Taylor & Francis
Reduced representation bisulfite sequencing (RRBS) has been used to profile DNA
methylation patterns in mammalian genomes such as human, mouse and rat. The …
methylation patterns in mammalian genomes such as human, mouse and rat. The …
Genome-wide DNA methylation profiling in zebrafish
Genomic DNA methylation functions to repress gene expression by interfering with
transcription factor binding and/or recruiting repressive chromatin machinery. Recent data …
transcription factor binding and/or recruiting repressive chromatin machinery. Recent data …
MethBank: a database integrating next-generation sequencing single-base-resolution DNA methylation programming data
DNA methylation plays crucial roles during embryonic development. Here we present
MethBank (http://dnamethylome. org), a DNA methylome programming database that …
MethBank (http://dnamethylome. org), a DNA methylome programming database that …
Embryonic DNA methylation: insights from the genomics era
O Bogdanović… - Briefings in functional …, 2014 - academic.oup.com
DNA methylation is an epigenetic mark associated with transcriptional repression and
essential for proper vertebrate development. Because of its association with human …
essential for proper vertebrate development. Because of its association with human …
DNA methylation in zebrafish
MG Goll, ME Halpern - Progress in molecular biology and translational …, 2011 - Elsevier
DNA methylation is crucial for normal development and cellular differentiation in many large-
genome eukaryotes. The small tropical freshwater fish Danio rerio (zebrafish) has recently …
genome eukaryotes. The small tropical freshwater fish Danio rerio (zebrafish) has recently …
DNA methylation profiling in zebrafish
DNA methylation on cytosine in vertebrates such as zebrafish serves to silence gene
expression by interfering with the binding of certain transcription factors and through the …
expression by interfering with the binding of certain transcription factors and through the …
Evolutionary conservation of embryonic DNA methylome remodelling in distantly related teleost species
SE Ross, J Vázquez-Marín, KRB Gert… - Nucleic Acids …, 2023 - academic.oup.com
Methylation of cytosines in the CG context (mCG) is the most abundant DNA modification in
vertebrates that plays crucial roles in cellular differentiation and identity. After fertilization …
vertebrates that plays crucial roles in cellular differentiation and identity. After fertilization …