The DNA methylome of pediatric brain tumors appears shaped by structural variation and predicts survival
F Chen, Y Zhang, L Shen, CJ Creighton - Nature Communications, 2024 - nature.com
Structural variation heavily influences the molecular landscape of cancer, in part by
impacting DNA methylation-mediated transcriptional regulation. Here, using multi-omic …
impacting DNA methylation-mediated transcriptional regulation. Here, using multi-omic …
Supratentorial and spinal pediatric ependymomas display a hypermethylated phenotype which includes the loss of tumor suppressor genes involved in the control of …
HA Rogers, JP Kilday, C Mayne, J Ward… - Acta …, 2012 - Springer
Epigenetic alterations, including methylation, have been shown to be an important
mechanism of gene silencing in cancer. Ependymoma has been well characterized at the …
mechanism of gene silencing in cancer. Ependymoma has been well characterized at the …
Stage 4S neuroblastoma tumors show a characteristic DNA methylation portrait
Stage 4S neuroblastoma (NB) is a special type of NB found in infants with metastases at
diagnosis and is associated with an excellent outcome due to its remarkable capacity to …
diagnosis and is associated with an excellent outcome due to its remarkable capacity to …
A pyrosequencing assay for the quantitative methylation analysis of the PCDHB gene cluster, the major factor in neuroblastoma methylator phenotype
B Banelli, C Brigati, A Di Vinci, I Casciano… - Laboratory …, 2012 - nature.com
Epigenetic alterations are hallmarks of cancer and powerful biomarkers, whose clinical
utilization is made difficult by the absence of standardization and of common methods of …
utilization is made difficult by the absence of standardization and of common methods of …
[HTML][HTML] Validation of whole genome methylation profiling classifier for central nervous system tumors
L Santana-Santos, KL Kam, D Dittmann… - The Journal of Molecular …, 2022 - Elsevier
The 2021 WHO Classification of Tumors of the Central Nervous System includes several
tumor types and subtypes for which the diagnosis is at least partially reliant on utilization of …
tumor types and subtypes for which the diagnosis is at least partially reliant on utilization of …
Identification of global DNA methylation signatures in glioblastoma-derived cancer stem cells
EJ Lee, P Rath, J Liu, D Ryu, L Pei… - Journal of genetics and …, 2015 - Elsevier
Glioblastoma (GBM) is the most common and most aggressive primary brain tumor in adults.
The existence of a small population of stem-like tumor cells that efficiently propagate tumors …
The existence of a small population of stem-like tumor cells that efficiently propagate tumors …
Two independent epigenetic biomarkers predict survival in neuroblastoma
Background Neuroblastoma (NB) is the most common extracranial pediatric solid tumor with
a highly variable clinical course, ranging from spontaneous regression to life-threatening …
a highly variable clinical course, ranging from spontaneous regression to life-threatening …
DNA methylation alterations across time and space in paediatric brain tumours
A Wenger, S Ferreyra Vega, E Schepke… - Acta Neuropathologica …, 2022 - Springer
DNA methylation is increasingly used for tumour classification and has expanded upon the>
100 currently known brain tumour entities. A correct diagnosis is the basis for suitable …
100 currently known brain tumour entities. A correct diagnosis is the basis for suitable …
Methylation markers of malignant potential in meningiomas
J Vengoechea, AE Sloan, Y Chen, X Guan… - Journal of …, 2013 - thejns.org
Object Although most meningiomas are benign, about 20% are atypical (Grade II or III) and
have increased mortality and morbidity. Identifying tumors with greater malignant potential …
have increased mortality and morbidity. Identifying tumors with greater malignant potential …
DNA methylation-based epigenetic signatures predict somatic genomic alterations in gliomas
Molecular classification has improved diagnosis and treatment for patients with malignant
gliomas. However, classification has relied on individual assays that are both costly and …
gliomas. However, classification has relied on individual assays that are both costly and …