No evidence for AID/MBD4-coupled DNA demethylation in zebrafish embryos

N Shimoda, K Hirose, R Kaneto, T Izawa, H Yokoi… - PLoS …, 2014 - journals.plos.org
The mechanisms responsible for active DNA demethylation remain elusive in Metazoa. A
previous study that utilized zebrafish embryos provided a potent mechanism for active …

[HTML][HTML] DNA demethylation in zebrafish involves the coupling of a deaminase, a glycosylase, and gadd45

K Rai, IJ Huggins, SR James, AR Karpf, DA Jones… - Cell, 2008 - cell.com
Evidence for active DNA demethylation in vertebrates is accumulating, but the mechanisms
and enzymes remain unclear. Using zebrafish embryos we provide evidence for 5 …

Immunological detection of changes in genomic DNA methylation during early zebrafish development

AB MacKay, AA Mhanni, RA McGowan, PH Krone - Genome, 2007 - cdnsciencepub.com
DNA methylation reprogramming, the erasure of DNA methylation patterns shortly after
fertilization and their reestablishment during subsequent early development, is essential for …

DNA methylation directs genomic localization of Mbd2 and Mbd3 in embryonic stem cells

SJ Hainer, KN McCannell, J Yu, LS Ee, LJ Zhu… - Elife, 2016 - elifesciences.org
Cytosine methylation is an epigenetic and regulatory mark that functions in part through
recruitment of chromatin remodeling complexes containing methyl-CpG binding domain …

The methyl-CpG-binding protein MBD7 facilitates active DNA demethylation to limit DNA hyper-methylation and transcriptional gene silencing

Z Lang, M Lei, X Wang, K Tang, D Miki, H Zhang… - Molecular cell, 2015 - cell.com
DNA methylation is a conserved epigenetic mark that plays important roles in plant and
vertebrate development, genome stability, and gene regulation. Canonical Methyl-CpG …

DNA methylation in zebrafish

MG Goll, ME Halpern - Progress in molecular biology and translational …, 2011 - Elsevier
DNA methylation is crucial for normal development and cellular differentiation in many large-
genome eukaryotes. The small tropical freshwater fish Danio rerio (zebrafish) has recently …

DNA demethylation induced by the methyl-CpG-binding domain protein MBD3

SE Brown, MJ Suderman, M Hallett, M Szyf - Gene, 2008 - Elsevier
The methyl-CpG binding domain protein MBD3 has been shown to be essential for
embryonic development and differentiation, and to act by suppressing gene expression …

Embryonic DNA methylation: insights from the genomics era

O Bogdanović… - Briefings in functional …, 2014 - academic.oup.com
DNA methylation is an epigenetic mark associated with transcriptional repression and
essential for proper vertebrate development. Because of its association with human …

Developmental enhancers revealed by extensive DNA methylome maps of zebrafish early embryos

HJ Lee, RF Lowdon, B Maricque, B Zhang… - Nature …, 2015 - nature.com
DNA methylation undergoes dynamic changes during development and cell differentiation.
Recent genome-wide studies discovered that tissue-specific differentially methylated …

Zebrafish Mbd5 binds to RNA m5C and regulates histone deubiquitylation and gene expression in development metabolism and behavior

J Guo, Z Zou, X Dou, X Zhao, Y Wang… - Nucleic Acids …, 2024 - academic.oup.com
Complex biological processes are regulated by both genetic and epigenetic programs. One
class of epigenetic modifications is methylation. Evolutionarily conserved methyl-CpG …