DNA methylation underpins the epigenomic landscape regulating genome transcription in Arabidopsis
L Zhao, Q Zhou, L He, L Deng, R Lozano-Duran, G Li… - Genome biology, 2022 - Springer
Background It is challenging to determine the effect of DNA methylation on the epigenetic
landscape and the function in higher organisms due to the lack of DNA methylation-free …
landscape and the function in higher organisms due to the lack of DNA methylation-free …
The value-added genome: building and maintaining genomic cytosine methylation landscapes
SH Rangwala, EJ Richards - Current opinion in genetics & development, 2004 - Elsevier
Epigenetic marks, such as cytosine methylation and post-translational histone modifications,
are important for interpreting and managing eukaryotic genomes. Recent genetic studies in …
are important for interpreting and managing eukaryotic genomes. Recent genetic studies in …
Interplay between Active Chromatin Marks and RNA-Directed DNA Methylation in Arabidopsis thaliana
DNA methylation is an epigenetic mark that is associated with transcriptional repression of
transposable elements and protein-coding genes. Conversely, transcriptionally active …
transposable elements and protein-coding genes. Conversely, transcriptionally active …
[HTML][HTML] Highly integrated single-base resolution maps of the epigenome in Arabidopsis
Deciphering the multiple layers of epigenetic regulation that control transcription is critical to
understanding how plants develop and respond to their environment. Using sequencing-by …
understanding how plants develop and respond to their environment. Using sequencing-by …
Genome-wide high-resolution mapping and functional analysis of DNA methylation in Arabidopsis
Cytosine methylation is important for transposon silencing and epigenetic regulation of
endogenous genes, although the extent to which this DNA modification functions to regulate …
endogenous genes, although the extent to which this DNA modification functions to regulate …
Transgenerational stability of the Arabidopsis epigenome is coordinated by CG methylation
O Mathieu, J Reinders, M Čaikovski, C Smathajitt… - Cell, 2007 - cell.com
Maintenance of CG methylation (m CG) patterns is essential for chromatin-mediated
epigenetic regulation of transcription in plants and mammals. However, functional links …
epigenetic regulation of transcription in plants and mammals. However, functional links …
Genome-wide analysis of Arabidopsis thaliana DNA methylation uncovers an interdependence between methylation and transcription
D Zilberman, M Gehring, RK Tran, T Ballinger… - Nature …, 2007 - nature.com
Cytosine methylation, a common form of DNA modification that antagonizes transcription, is
found at transposons and repeats in vertebrates, plants and fungi. Here we have mapped …
found at transposons and repeats in vertebrates, plants and fungi. Here we have mapped …
DNA methylation dynamics during early plant life
D Bouyer, A Kramdi, M Kassam, M Heese, A Schnittger… - Genome biology, 2017 - Springer
Background Cytosine methylation is crucial for gene regulation and silencing of
transposable elements in mammals and plants. While this epigenetic mark is extensively …
transposable elements in mammals and plants. While this epigenetic mark is extensively …
The causes and consequences of DNA methylome variation in plants
DK Seymour, C Becker - Current opinion in plant biology, 2017 - Elsevier
Highlights•Epigenetic variation in plants is frequently linked to genetic variation.•Single large
effect mutations perturb the epigenetic landscape in trans.•DNA methylation regulates …
effect mutations perturb the epigenetic landscape in trans.•DNA methylation regulates …
Putting DNA methylation in context: from genomes to gene expression in plants
CE Niederhuth, RJ Schmitz - Biochimica et Biophysica Acta (BBA)-Gene …, 2017 - Elsevier
Plant DNA methylation is its own language, interpreted by the cell to maintain silencing of
transposons, facilitate chromatin structure, and to ensure proper expression of some genes …
transposons, facilitate chromatin structure, and to ensure proper expression of some genes …