High levels of de novo methylation and altered chromatin structure at CpG islands in cell lines

F Antequera, J Boyes, A Bird - Cell, 1990 - cell.com
CpG islands are normally methylation free in cells of the animal, even when the associated
gene is transcriptionally silent. In mouse NIH 3T3 and L cells, however, over half of the …

DNA methylation profiles of CpG islands for cellular differentiation and development in mammals

K Shiota - Cytogenetic and genome research, 2004 - karger.com
DNA methylation has been implicated in mammalian development. Transcription units
contain CpG islands, but expression of CpG island associated genes in normal tissues was …

[HTML][HTML] Mapping patterns of CpG island methylation in normal and neoplastic cells implicates both upstream and downstream regions inde novo methylation

JR Graff, JG Herman, S Myöhänen, SB Baylin… - Journal of Biological …, 1997 - ASBMB
Promoter region CpG island methylation is associated with tumor suppressor gene silencing
in neoplasia. GenBank sequence analyses revealed that a number of CpG islands are …

Aberrant CpG-island methylation has non-random and tumour-type–specific patterns

JF Costello, MC Frühwald, DJ Smiraglia, LJ Rush… - Nature …, 2000 - nature.com
CpG islands frequently contain gene promoters or exons 1 and are usually unmethylated in
normal cells 1, 2, 3. Methylation of CpG islands is associated with delayed replication …

DNA methylation of intragenic CpG islands depends on their transcriptional activity during differentiation and disease

DM Jeziorska, RJS Murray… - Proceedings of the …, 2017 - National Acad Sciences
The human genome contains∼ 30,000 CpG islands (CGIs). While CGIs associated with
promoters nearly always remain unmethylated, many of the∼ 9,000 CGIs lying within gene …

DNA methylation and chromatin structure: the puzzling CpG islands

P Caiafa, M Zampieri - Journal of cellular biochemistry, 2005 - Wiley Online Library
DNA methylation is the epigenetic modification, which introduces 5mC as fifth base onto
DNA. As for the distribution of 5mCs, it is well known that they distribute themselves in a non …

Methylation-specific PCR: a novel PCR assay for methylation status of CpG islands.

JG Herman, JR Graff, S Myöhänen… - Proceedings of the …, 1996 - National Acad Sciences
Precise mapping of DNA methylation patterns in CpG islands has become essential for
understanding diverse biological processes such as the regulation of imprinted genes, X …

Excessive CpG island hypermethylation in cancer cell lines versus primary human malignancies

DJ Smiraglia, LJ Rush, MC Frühwald… - Human molecular …, 2001 - academic.oup.com
Cancer cell lines are widely used in many types of cancer research, including studies aimed
at understanding DNA hypermethylation of gene promoters in cancer. Hypermethylation of …

[HTML][HTML] CpG islands–'a rough guide'

RS Illingworth, AP Bird - FEBS letters, 2009 - Elsevier
Mammalian genomes are punctuated by DNA sequences containing an atypically high
frequency of CpG sites termed CpG islands (CGIs). CGIs generally lack DNA methylation …

CpG island methylator phenotype in colorectal cancer

M Toyota, N Ahuja, M Ohe-Toyota… - Proceedings of the …, 1999 - National Acad Sciences
Aberrant methylation of promoter region CpG islands is associated with transcriptional
inactivation of tumor-suppressor genes in neoplasia. To understand global patterns of CpG …