A framework for analyzing DNA methylation data from Illumina Infinium HumanMethylation450 BeadChip
Z Wang, XL Wu, Y Wang - BMC bioinformatics, 2018 - Springer
Background DNA methylation has been identified to be widely associated to complex
diseases. Among biological platforms to profile DNA methylation in human, the Illumina …
diseases. Among biological platforms to profile DNA methylation in human, the Illumina …
missMethyl: an R package for analyzing data from Illumina's HumanMethylation450 platform
DNA methylation is one of the most commonly studied epigenetic modifications due to its
role in both disease and development. The Illumina HumanMethylation450 BeadChip is a …
role in both disease and development. The Illumina HumanMethylation450 BeadChip is a …
MACON: a web tool for computing DNA methylation data obtained by the Illumina Infinium Human DNA methylation BeadArray
N Iida, Y Okuda, O Ogasawara, S Yamashita… - …, 2018 - Taylor & Francis
Aim: Bioinformatics analysis for Illumina Infinium Human DNA methylation BeadArray is
essential, but still remains difficult task for many experimental researchers. We here aimed to …
essential, but still remains difficult task for many experimental researchers. We here aimed to …
An evaluation of analysis pipelines for DNA methylation profiling using the Illumina HumanMethylation450 BeadChip platform
The proper identification of differentially methylated CpGs is central in most epigenetic
studies. The Illumina HumanMethylation450 BeadChip is widely used to quantify DNA …
studies. The Illumina HumanMethylation450 BeadChip is widely used to quantify DNA …
shinyÉPICo: a graphical pipeline to analyze Illumina DNA methylation arrays
O Morante-Palacios, E Ballestar - Bioinformatics, 2021 - academic.oup.com
Illumina DNA methylation bead arrays provide a cost-effective platform for the simultaneous
analysis of a high number of human samples. However, the analysis can be time …
analysis of a high number of human samples. However, the analysis can be time …
ChAMP: updated methylation analysis pipeline for Illumina BeadChips
Abstract Summary The Illumina Infinium HumanMethylationEPIC BeadChip is the new
platform for high-throughput DNA methylation analysis, effectively doubling the coverage …
platform for high-throughput DNA methylation analysis, effectively doubling the coverage …
Marmal-aid-a database for Infinium HumanMethylation450
R Lowe, VK Rakyan - BMC bioinformatics, 2013 - Springer
Background DNA methylation is indispensible for normal human genome function. Currently
there is an increasingly large number of DNA methylomic data being released in the public …
there is an increasingly large number of DNA methylomic data being released in the public …
IMA: an R package for high-throughput analysis of Illumina's 450K Infinium methylation data
The Illumina Infinium HumanMethylation450 BeadChip is a newly designed high-density
microarray for quantifying the methylation level of over 450 000 CpG sites within human …
microarray for quantifying the methylation level of over 450 000 CpG sites within human …
A data-driven approach to preprocessing Illumina 450K methylation array data
Background As the most stable and experimentally accessible epigenetic mark, DNA
methylation is of great interest to the research community. The landscape of DNA …
methylation is of great interest to the research community. The landscape of DNA …
[HTML][HTML] A cross-package Bioconductor workflow for analysing methylation array data
Methylation in the human genome is known to be associated with development and disease.
The Illumina Infinium methylation arrays are by far the most common way to interrogate …
The Illumina Infinium methylation arrays are by far the most common way to interrogate …