[HTML][HTML] DNA methylation profiling identifies CG methylation clusters in Arabidopsis genes

RK Tran, JG Henikoff, D Zilberman, RF Ditt… - Current Biology, 2005 - cell.com
Cytosine DNA methylation in vertebrates is widespread, but methylation in plants is found
almost exclusively at transposable elements and repetitive DNA [1]. Within regions of …

Conservation and divergence in eukaryotic DNA methylation

T Lee, J Zhai, BC Meyers - Proceedings of the National …, 2010 - National Acad Sciences
Cytosine methylation is a com-mon DNA modification found in most eukaryotic organisms
including plants, animals, and fungi (1, 2). The addition of a methyl group to cytosine …

Non-CG methylation patterns shape the epigenetic landscape in Arabidopsis

H Stroud, T Do, J Du, X Zhong, S Feng… - Nature structural & …, 2014 - nature.com
DNA methylation occurs in CG and non-CG sequence contexts. Non-CG methylation is
abundant in plants and is mediated by CHROMOMETHYLASE (CMT) and DOMAINS …

Evolutionary patterns of genic DNA methylation vary across land plants

S Takuno, JH Ran, BS Gaut - Nature plants, 2016 - nature.com
Little is known about patterns of genic DNA methylation across the plant kingdom or about
the evolutionary processes that shape them. To characterize gene-body methylation (gbM) …

Methylation and demethylation of the Arabidopsis genome

IJ Furner, M Matzke - Current opinion in plant biology, 2011 - Elsevier
The primary sequence of the genome is broadly constant and superimposed upon that
constancy is the postreplicative modification of a small number of cytosine residues to 5 …

Locus-specific control of asymmetric and CpNpG methylation by the DRM and CMT3 methyltransferase genes

X Cao, SE Jacobsen - … of the National Academy of Sciences, 2002 - National Acad Sciences
Many plant, animal, and fungal genomes contain cytosine DNA methylation in asymmetric
sequence contexts (CpHpH, H= A, T, C). Although the enzymes responsible for this …

Establishment, maintenance, and biological roles of non-CG methylation in plants

SK Kenchanmane Raju, EJ Ritter… - Essays in …, 2019 - portlandpress.com
Cytosine DNA methylation is prevalent throughout eukaryotes and prokaryotes. While most
commonly thought of as being localized to dinucleotide CpG sites, non-CG sites can also be …

Genome-wide analysis of Arabidopsis thaliana DNA methylation uncovers an interdependence between methylation and transcription

D Zilberman, M Gehring, RK Tran, T Ballinger… - Nature …, 2007 - nature.com
Cytosine methylation, a common form of DNA modification that antagonizes transcription, is
found at transposons and repeats in vertebrates, plants and fungi. Here we have mapped …

On the origin and evolutionary consequences of gene body DNA methylation

AJ Bewick, L Ji, CE Niederhuth… - Proceedings of the …, 2016 - National Acad Sciences
In plants, CG DNA methylation is prevalent in the transcribed regions of many constitutively
expressed genes (gene body methylation; gbM), but the origin and function of gbM remain …

[HTML][HTML] DNA methylation systems and targets in plants

P Meyer - FEBS letters, 2011 - Elsevier
Plants contain three distinct DNA methyltransferase types that are responsible for the
establishment and maintenance of cytosine methylation patterns at heterochromatic and …